Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00004096-protein ID=TCONS_00004096-protein|Name=TCONS_00004096-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1502bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00004096-protein vs. Swiss-Prot (Human)
Match: NU188 (Nucleoporin NUP188 homolog OS=Homo sapiens GN=NUP188 PE=1 SV=1) HSP 1 Score: 527.324 bits (1357), Expect = 1.302e-159 Identity = 435/1589 (27.38%), Postives = 765/1589 (48.14%), Query Frame = 0 Query: 4 LAEILFLYYKDFEM-PFDIFQDLALLFRRHHFGTSQVNQKLLTLNGLVQIQKFELISSMILVEGIDLEVIRKTTAEDISEIKDHSLLQNE-NWKKIDKLLYSWDDMEQQGPVLIAWTIFRHMCLPQDEKHLTAHFGESAMRCNVMLYLRHILDFPSYKKLGD----GVSCLLKSHVYILVSMVLKVFQEDTLGDFKNLIEIASKVLEEPILSSLFLMEDQTGGIGLLLKSAKRCFPHAVLPYIHLLKSVCTDADSADIVFDSLESQETFTELFGLNAVDEISAVDDRIWQRKISRKIIEMDNDS-IILDQGVYGRTFQDREDARLIQWNMSYSGWLYALLELNKIIESPMTYTTGSGEDGISVAKEYISLVSAILTSRPDKINEFEPIIGSLIVLIKRLSHLKTCPIDLMTECLKCLNLVMLKQPLEVWHHLTKIQFLPF--QKKSSLS----SNEMLPGSYGNILTTVEIPNHMYDVTKEYLQIIMTLLELPYETLINAGKQNELYMDLAVNIVLIIKEIFSHFGRWKFSSAEDKELIALKCLEIFHQLLSPKNEESLLIKEKNLPSLKEIVSDGLLYHGAGESLLAIISVGVDSLSVTLHNDVR--------QGTDVIQVLKLSFAVLNHLLTSVEKKATLTPLEEVLSQHFVQQPSDLDFMHPFCNMTMLSVIAKFIFHQQDPKLPILAVLTLRTLAIRFPLILTSSLGDALIGIRNAFVNRLNGRVEAIRLKVAILEFLSSCVESQPGIIECFINIQ----QDKEKKTVVGQFSCLPAILEILENKQQ-----VDVLTSTALEFVAALWKNRYDGAMSILKNSKTFWESVTSSL-----KLGSSSEAATYEPLQHSLNIIGTETYYIKSGQFDERLKAQLTPLCNEN---FYKNILKVFEPH---TDTVLCQK--KIAVMKSFQTLITVMSKLEDDYCSLCKKEVKDLLSSSITKIMKQWVFSEDVSKNRNVIVEIASFTWLLIRTWKGTIVEHQDIVSTLTECLTELSTSDRTIFAEVVFPVYMSILALLQTQNKAV------------IGSTLYLNLLKLVIQNLH--------------HHDE--KSEQFTKHTQVNIASISLMTELVLQISKDSLPSVIETFQSRGTIQNLLRDMTINLQKRIDLEYVETVLRFMLSSSQKDLIAEHLHQCGIGKFKCLNLNNV------------QAARKSSQVAR--EIWSLILSLTARLLKKLRFTFLQVAVDFLGAYEEDIFQSMNLMEEMTNGSCLLISEQIAILCFELAHYDHDIEFLLPDIHQKLKYGVAQMVKLSVALLARQKLITHLTEFKSTDDLHQMIRGTKEPSPVSFRSDSVRSGYSTADFEKLTGLA-EVAQNRLISILCYCLGSLRRITPSVVEAILDEGMDIDSFTPLVDFKFNSPTLEMEDNPTFGSLLACVNIALKMIYKLVQGDSEHVTPEKDVFNTSLPTDADKQR---SHLWFIVENSLIVTISQASCYLRHPNINEGGKQFLKRELGSELTNIRHAVQRYRSRRGIPPSPESSERLSASSMSSFRRSPSKLSSSIS-LNEEEENSVLKLVDTYTRYLLR 1502 L EI+FLYY FEM P D+ L +F+ FG+ Q N+ L+ + + S++ILVEG+D+E + K +D E+ H Q+ + +D L+ ++ D+ PVL+AW + RH P++ + G +A++ NV YL +L S G+ +C+ VY L+S VL + TLG+ +++I+ A +VL +P L LF + T G+G++L S FPH + P + LL+++ + +A V+ L+ + EL+ D IS D +W+R+ + + + + + + QG G+ D + A L++W SYS W E+ ++ +T K I LV ++++ + PI + +L++RL+ + + P+D++ C+ CL ++ + P +VW L FLPF SSLS + M G YGN+L E P Y VT +L++I TL++ + + G L ++ ++KE+ + +W+++S +E I LE+ H +L+ +E L + PSL+ + L Y AG++++ I+ +GVD++ + + R QG +I+ +KL+F+V N+++ ++PLE+ LSQH +++V+AK+I+H+ DP LP LA+ L+ LA P+ + + LG+ IR+AF+ RL ++E +R+KV ILEFL+ VE+QPG+IE F+N++ D K+ +G +SCL A+LE+++++QQ +L A+ F+ ALW++R D AM +L+ FWE++TS L +SE + E + II E YY+ G D+ LK L E ++ +K H T+ C + ++ S ++ +++ D L V+ L + K + + + +L+R WK + +I+ LTE L + +D+ + + V+ + + +LQ + V + TL ++ L Q H D+ +S + V + + L EL ++ +D S ++ + + LL + ++L+ + +L + E L +L+ ++ A + GI + CL L +V A+RKS ++ L +SL +LLK LR+ FL A+DF+G ++E Q +N + + + +CL ++ +L+++ + F LP + + ++ + + + +LL +K++ H + K+ D L + + P + + S AD E A Q L+ IL L +LR TP V + +LD+ +D+ + L F +PT + E P+FG+LLA VN+AL M+ +L + E L T A+ R S L F +EN + ISQA YLR P ++ KQ +K+EL SEL+ + ++ RY RRG P SP + SP S+S+S + E + +++LV + R++ R Sbjct: 214 LLEIIFLYYAYFEMAPSDLLV-LTKMFKEQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCALDDRREL--HQFAQDGLICQDMDCLMLTFGDIPHHAPVLLAWALLRHTLNPEETSSVVRKIGGTAIQLNVFQYLTRLLQ--SLASGGNDCTTSTACMC---VYGLLSFVLTSLELHTLGNQQDIIDTACEVLADPSLPELFWGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKHKPHDVISHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLD-DRAYLVRWEYSYSSWTLFTCEIEMLLH---VVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRLTTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFVAHPVSSLSQMISAEGMNAGGYGNLLMNSEQPQGEYGVTIAFLRLITTLVKGQLGSTQSQG--------LVPCVMFVLKEMLPSYHKWRYNSHGVREQIGCLILELIHAILNLCHETDL--HSSHTPSLQFLCICSLAYTEAGQTVINIMGIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQALSQHGAH------------GNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRDAFLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGMWSCLHAVLELIDSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGTLSPPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSIEKRFAYWSGYVKSLAVHVAETEGSSCTSLLEYQMLVSAWRMLLIIATTHADIMHLTDSVVRRQLFLDVLDGTKALLLVPASVNCLRLGSMKCTLLLILLRQWKRELGSVDEILGPLTEILEGVLQADQQLMEKTKAKVFSAFITVLQMKEMKVSDIPQYSQLVLNVCETLQEEVIALFDQTRHSLALGSATEDKDSMETDDCSRSRHRDQRDGVCVLGLHLAKELC-EVDEDG-DSWLQVTRRLPILPTLLTTLEVSLRMKQNLHFTEATLHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSTNGTAQTPSASRKSLDAPSWPGVYRLSMSLMEQLLKTLRYNFLPEALDFVGVHQERTLQCLNAVRTVQSLACLEEADHTVGFILQLSNFMKEWHFHLPQLMRDIQVNLGYLCQACTSLLHSRKMLQHYLQNKNGDGLPSAVAQRVQRPPSAASAAPSSSKQPAADTEASEQQALHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFGTLLATVNVALNMLGELDKKK------EPLTQAVGLSTQAEGTRTLKSLLMFTMENCFYLLISQAMRYLRDPAVHPRDKQRMKQELSSELSTLLSSLSRY-FRRGAPSSPA----------TGVLPSPQGKSTSLSKASPESQEPLIQLVQAFVRHMQR 1749 The following BLAST results are available for this feature:
BLAST of TCONS_00004096-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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