TCONS_00004007-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004007-protein
Unique NameTCONS_00004007-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length407

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004007-protein ID=TCONS_00004007-protein|Name=TCONS_00004007-protein|organism=Clytia hemisphaerica|type=polypeptide|length=407bp
SEIAKRGCVVLYFKMAAQGEGNIGGYIPPTFPQRNGYERETPILDSGPDH
SMEDMIKEATDMQSGSSFNRSRLRMQTDEGVSPFQQPAAQPNSSYSSSSS
YKATPNTLQSPFGNPQPQSSYSSSSHNMAPSGYGNQQQSQSGGYNAPQPQ
GTQLVKGADAGVKLEALKKWTMSTYKYTKQMVSEKMGRRTRTVDTELEKH
IQGLKEMQLRYTNLLKLSKQFQSQFQNILVTQKLMGEAFNELAVKSPDLQ
EEFSQNAELQKVVSKNGDALISALTFFNENLWTLSTKTIEDTIQTIRDYE
NCRIEYDAYRTDLEAHEAVGQSMKTEQARKEFNEHKEKFESLRNNLQIKM
KFLEENKVKVMRKQLLILHNALAAYFSGNKDELEKTMKEFHIRVMNKGEE
ASFLETH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002253XLOC_002253Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004007TCONS_00004007Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010504AH_dom
IPR027267AH/BAR-dom
Vocabulary: Molecular Function
TermDefinition
GO:0019904protein domain specific binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0019904 protein domain specific binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 325..363
NoneNo IPR availableGENE3D1.20.1270.60coord: 178..392
e-value: 1.4E-30
score: 106.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..153
NoneNo IPR availableCDDcd07660BAR_Arfaptincoord: 194..390
e-value: 6.92134E-97
score: 289.994
IPR010504Arfaptin homology (AH) domainSMARTSM01015Arfaptin_2coord: 160..383
e-value: 3.2E-78
score: 275.9
IPR010504Arfaptin homology (AH) domainPFAMPF06456Arfaptincoord: 173..382
e-value: 5.0E-57
score: 193.0
IPR010504Arfaptin homology (AH) domainPROSITEPS50870AHcoord: 192..388
score: 30.15
IPR027267Arfaptin homology (AH) domain/BAR domainSUPERFAMILY103657BAR/IMD domain-likecoord: 191..384

Blast
[Close]
BLAST of TCONS_00004007-protein vs. Swiss-Prot (Human)
Match: ARFP1 (Arfaptin-1 OS=Homo sapiens GN=ARFIP1 PE=1 SV=2)

HSP 1 Score: 249.98 bits (637), Expect = 1.170e-79
Identity = 120/248 (48.39%), Postives = 183/248 (73.79%), Query Frame = 0 
Query:  163 KLEALKKWTMSTYKYTKQMVSEKMGRRTRTVDTELEKHIQGLKEMQLRYTNLLKLSKQFQSQFQNILVTQKLMGEAFNELAVKSPDLQEEFSQNAELQKVVSKNGDALISALTFFNENLWTLSTKTIEDTIQTIRDYENCRIEYDAYRTDLE----AHEAVGQSMKTEQARKEFNEHKEKFESLRNNLQIKMKFLEENKVKVMRKQLLILHNALAAYFSGNKDELEKTMKEFHIRVMNKGEEA-SFLE 405
            KLE ++KW+++TYK T+Q++SEK+GR +RTVD ELE  I  L++ + +Y N+LKL++   +Q   ++ TQ+ +G+AF +L++KS +L EEF  NA+ QK+++KNG+ L+ A+ FF  ++ TL  KTIEDT+ T++ YE+ RIEYDAYRTDLE             K EQ++  F  HKEK++ +RN++ +K+KFLEENKVKV+  QL++ HNA+AAYF+GN+ +LE+T+K+FHI++   G +A S+LE
Sbjct:  124 KLELVRKWSLNTYKCTRQIISEKLGRGSRTVDLELEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFGYNADTQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELNLGPRDANTLPKIEQSQHLFQAHKEKYDKMRNDVSVKLKFLEENKVKVLHNQLVLFHNAIAAYFAGNQKQLEQTLKQFHIKLKTPGVDAPSWLE 371
The following BLAST results are available for this feature:
BLAST of TCONS_00004007-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARFP11.170e-7948.39Arfaptin-1 OS=Homo sapiens GN=ARFIP1 PE=1 SV=2[more]
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