TCONS_00003881-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00003881-protein
Unique Name	TCONS_00003881-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	951

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00003881-protein ID=TCONS_00003881-protein|Name=TCONS_00003881-protein|organism=Clytia hemisphaerica|type=polypeptide|length=951bp
MLRKLLEVQRQLIDKTLSTTMGKGKRFFKHKNKKKERDFNQNERIQRPSK
NVYFQVIWSGTDGHPPCLFLFTDSKRYIFNCTEGTQRLFTQNRVKIGKLD
TFFFTRHQWSHLGGFPGFAMTLRDSTNAANLGQLLATQKPQDVKKKLTVN
VYGPDGIQNVLAAAHGFMKFDKSGMCLETHEYGKNKVGKIYEDIELAVQP
IPIFGSAPVSASGMSFSRHRLLEPLMPSLTHAPPALCFGIHLKPLPGKFD
PVRANELGVPSGPLRGQLQAGIEVTLDNGTVVKKSDVCDPDIPGTHILIV
DCPSISFIDSLTTNNILQKYTVKGEQQAGLVLHLSPQTVCDNPKYVKWIK
KFQLETRHTFANNIPHNIPVFRGQYSLQAMLNVVDQNIFPLIEQNVKPEI
GKTDILYNLTKIQLRGISSNSVECFDHSSSFKEDKIEKLQEIAQTALDTF
KNQSKETEYELKSDEGRKRQVKENGAESGVTENKKLHLDATPKAKSYPQV
LFLGTGAAIPSKYRNVSATLLFLSENNGVLLDCGEDTYGQLFRHYGNKID
NVLKRIKMILISHLHADHHLGLFTLLSRISAVKTPDQNVVVVAPYYYRNW
FMSYAETSQPLHCQFVSCRSTLDGSWLTKEIFVKSIKVDHPASAHGFMVK
DKKHSVVYSGDTKPCQRLIQEGQNCTMLIHEATLEDEMFEDALTRKHSTT
SQALDVAHQMKAKNLVMTHFSQRYPRIPKLKNTPITSHCAIAFDHMELSL
EDVPKFQHYIPKIVQMFDLREKDETEEDEKEKKNNEEEKKNKEEERTKNT
QSNERQNDRRANNDDSDRKRNEFDGRRAGGSGTKNYQMNNCADEKTKSDS
IGKDDSIINVGLDKKAVSVDQNTDPVKTTDDKEDDNYDATNMCKNDDENV
NKPSDDTDCKSDKNIETVSMDVEVDCKKQETENVNKHLGDVKSDCKATKE
E

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002179	XLOC_002179	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00003881	TCONS_00003881	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001279	Metallo-B-lactamas
IPR027794	tRNase_Z_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0008033	tRNA processing

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008033	tRNA processing

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 769..805
None	No IPR available	COILS	Coil	Coil	coord: 436..456
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 457..481
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 772..913
IPR001279	Metallo-beta-lactamase	PFAM	PF12706	Lactamase_B_2	coord: 529..720 e-value: 2.0E-18 score: 66.6
IPR001279	Metallo-beta-lactamase	GENE3D	3.60.15.10		coord: 57..340 e-value: 7.9E-15 score: 53.9
IPR001279	Metallo-beta-lactamase	GENE3D	3.60.15.10		coord: 498..763 e-value: 1.5E-48 score: 164.4
IPR001279	Metallo-beta-lactamase	SUPERFAMILY	56281	Metallo-hydrolase/oxidoreductase	coord: 499..748
IPR001279	Metallo-beta-lactamase	SUPERFAMILY	56281	Metallo-hydrolase/oxidoreductase	coord: 60..306
IPR027794	tRNase Z endonuclease	PFAM	PF13691	Lactamase_B_4	coord: 62..114 e-value: 5.2E-16 score: 58.0

Blast

[Close]

BLAST of TCONS_00003881-protein vs. Swiss-Prot (Human)
Match: RNZ2 (Zinc phosphodiesterase ELAC protein 2 OS=Homo sapiens GN=ELAC2 PE=1 SV=2)

HSP 1 Score: 329.331 bits (843), Expect = 4.630e-99
Identity = 232/778 (29.82%), Postives = 368/778 (47.30%), Query Frame = 0

Query:   51 NVYFQVIWSGTDGHPPCLFLFTDSKRYIFNCTEGTQRLFTQNRVKIGKLDTFFFTRHQWSHLGGFPGFAMTLRDSTNAANLGQLLATQKPQDVKKKLTVNVY-GP-DGIQNVLAAAHGFMKFDKSGMCLETHEYGKNKVGKIYEDIELAVQPIPIFGSAPVSASGMSFSRHRLLEPLMPSLT----------HAP---------------PALCFGIHLKPLPGKFDPVRANELGVPSG-----PLRGQLQAGIEVTLDNGTVVKKSDVCDPDIPGTHILIVDCPSISFIDSLTTNNILQKYTVKGEQQAGLVLHLSPQTVCDNPKYVKWIKKFQLETRHTFANNIPHNIPVFRGQYSLQAMLNVVDQNIFPLIEQNVKPEIGKTDIL-----YNLTKIQLRGISSNSVECFDHSSSFKEDKIEKL--QEIAQTALDTFKNQSKETEYELKSDEGRKRQVKENGAESGVTENKKLHLDATPKAKSYPQVLFLGTGAAIPSKYRNVSATLLFLSENNGVLLDCGEDTYGQLFRHYGNKIDNVLKRIKMILISHLHADHHLGLFTLLSR----ISAVKTPDQNVVVVAPYYYRNWFMSYAETSQPL--HCQFVSCRSTLDGSWLTKEIFVKSIK---------------VDHPASAHGF-MVKDKKHSVVYSGDTKPCQRLIQEGQNCTMLIHEATLEDEMFEDALTRKHSTTSQALDVAHQMKAKNLVMTHFSQRYPRIPKLKNTPITSHCAIAFDHMELSLEDVPKFQHYIPKIVQMF 767
             VY QV+ +G+      L++F++  RY+FNC EG QRL  ++++K+ +LD  F TR  WS++GG  G  +TL+++     L + + +  PQ  K    + ++ GP  GI+                + +  H   +      YED  + V  IPI             S  R L  L P  +          H P                A    +HLK   G F  ++A E+G+P G     P+   ++ G  +T   G  +   ++C P  PG   ++V+CP  SFI  +  N   Q+Y  K +    LV+H++P +V  + +Y +W+++F  +T+H   N    ++   R  + +Q  LN++  +IFPL+      + G T  +       L K QLR               ++ D I     +E    AL     Q    EY   + +G                          K   YP+++FLGTG+AIP K RNVSATL+ +S +  +LLDCGE T+GQL RHYG+++D VL  +  + +SHLHADHH GL ++L +    ++++  P   ++VVAP   + W   Y    Q +  H   +  +   +G+ ++     + I                V H   A G  +V      VVYSGDT PC+ L++ G++ T+LIHEATLED + E+A+ + HSTTSQA+ V  +M A+ +++ HFSQRY ++P L +   +    +AFDHM++   D P     IP +  +F
Sbjct:   57 TVYLQVVAAGSRDSGAALYVFSEFNRYLFNCGEGVQRLMQEHKLKVARLDNIFLTRMHWSNVGGLSGMILTLKET----GLPKCVLSGPPQLEKYLEAIKIFSGPLKGIE----------------LAVRPHSAPE------YEDETMTVYQIPIHSEQRRGKHQPWQSPERPLSRLSPERSSDSESNENEPHLPHGVSQRRGVRDSSLVVAFICKLHLKR--GNFLVLKAKEMGLPVGTAAIAPIIAAVKDGKSIT-HEGREILAEELCTPPDPGAAFVVVECPDESFIQPICENATFQRYQGKADAPVALVVHMAPASVLVDSRYQQWMERFGPDTQHLVLNENCASVHNLRS-HKIQTQLNLIHPDIFPLLTSFRCKKEGPTLSVPMVQGECLLKYQLRP-----------RREWQRDAIITCNPEEFIVEALQLPNFQQSVQEYRRSAQDGPA---------------------PAEKRSQYPEIIFLGTGSAIPMKIRNVSATLVNISPDTSLLLDCGEGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHHTGLPSILLQRERALASLGKPLHPLLVVAPNQLKAWLQQYHNQCQEVLHHISMIPAKCLQEGAEISSPAVERLISSLLRTCDLEEFQTCLVRHCKHAFGCALVHTSGWKVVYSGDTMPCEALVRMGKDATLLIHEATLEDGLEEEAVEKTHSTTSQAISVGMRMNAEFIMLNHFSQRYAKVP-LFSPNFSEKVGVAFDHMKVCFGDFPTMPKLIPPLKALF 771

The following BLAST results are available for this feature:

BLAST of TCONS_00003881-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00003881-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
RNZ2	4.630e-99	29.82	Zinc phosphodiesterase ELAC protein 2 OS=Homo sapi...	[more]

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TCONS_00003881-protein (polypeptide) - C. hemisphaerica