TCONS_00003829-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003829-protein
Unique NameTCONS_00003829-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length844

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003829-protein ID=TCONS_00003829-protein|Name=TCONS_00003829-protein|organism=Clytia hemisphaerica|type=polypeptide|length=844bp
XSTHTMKCATSLSPDEQIRESYAKCFETNPKSDPNVQEILDEFESDTVFK
DGHYEIKLPFKEEITNLGDNYARSKIRLKNMVQKQFKDNPEFLKTYDEIL
QQQLSAGVIEKVEHYEIGQTHYLPHRPVVREDKQSTKVRIVFDASCKSYK
GGESLNDTLNPGPSITELLGDVLLRFRSYNYAFTADIEKAFLQIGITPEH
RDFVRFIWFENPHSIDYENFEENKLCEYRFARVLFGLNASPFLLQATLNK
HITNCTDSLENKEKLKNSLHVDDMTSGANTIEEAVDFYMSSKRNLHDGGF
NLRKFKASNRELENIVYDLFPEDKEFSSEQKVLGLNWDRNNDTVYFNFRE
LREKFVAMPTKRAILHNMASIYDPLGLISPLFVSFKTLFQDICEEKFDWD
DILPDRLTERWEKILLEFNKIDKIEIDRPYCIESLHDNIKTVGAHIFSDA
SKYMFGAAVYLRFVLESGSVKTALVSSKNRIISAKTLKSKHNTTPRNELN
GILLATSHGPAVIEALKNSYNISETFYWTDSSIACAWVQNEKKNEDSYVE
DRVKKIKTVIKKPLSHLKLVPSEINPSDILTKVHYPLGLARNELWFYGPQ
FLTEKKNAWPDLKPGFSFKTNTNSVTATPASTDLSAAKINISEIIDYKKF
NDFSKTSRVLAWAIHFVSKITLKKEEEDTIETKQINNKTKQIIHNNKDCG
GVLSIVELELARNLLIEDSQRGLENGKNFTNLKKQLDLFQDENGLWRCGG
RLKNSELTYEQKHPLLIDRKHPIAKVIIRESHANVMHNGVSQTLTNLRKR
YWITKPRNLIKTVIKECTTCRKHEGKPYGYPNEPSLPRERVTAN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002138XLOC_002138Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003829TCONS_00003829Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008042Retrotrans_Pao
IPR012337RNaseH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008042Retrotransposon, PaoPFAMPF05380Peptidase_A17coord: 360..531
e-value: 8.1E-44
score: 149.4
NoneNo IPR availableGENE3D3.10.10.10coord: 74..240
e-value: 1.1E-16
score: 60.4
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 80..341
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 443..594
e-value: 0.0028
score: 16.9

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003829-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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