TCONS_00003636-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003636-protein
Unique NameTCONS_00003636-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length502

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003636-protein ID=TCONS_00003636-protein|Name=TCONS_00003636-protein|organism=Clytia hemisphaerica|type=polypeptide|length=502bp
MMEEHKETESLLQNENVNDDDIEPKGDDYTIEEAIERIGFGKFQLKLLAM
VGFAWSADSLEMALLAILAPAVRCEWHLSHYHEAMLTTIVFIGMLIFSYF
WGWASDTYGRRKVLIWSTTGVFVFGLVSAFSHTYVMILLLRGGVGASMAG
TVQGTTLIVEYLPVAARGLSINVSGIFWSAGTCFEVLSAMYIMPRHGWRV
LLFWSAWPCLIFVVATLLSKQPPESVRFLVSKGRQKEAEEILHKAAKENN
KEEKLQGNLITLEKEQSEYKHGSFSGLFKRGYWRQTLLLWVMWFASHFNI
YGLSLLTTALFSSSYTCYGEPAAKKHETENCKPLTQADYLHFFYVLAADF
PAILVTAILTDTVGRKWLQAIGFFVMGIFFTLLLLCTSSRNWTTFFLFGV
RCFAAVADVGGYIYTPEVYPTEIRGIALGSCSAISRIGAMLTPFVSQVLT
HTNLSLSLSIYIGFSIIGGVCSLLLPIETKGKGLEEINEDLRKLGNDRME
DT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002018XLOC_002018Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003636TCONS_00003636Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR005828MFS_sugar_transport-like
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0022857 transmembrane transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 235..265
NoneNo IPR availableGENE3D1.20.1250.20coord: 261..501
e-value: 1.5E-30
score: 105.5
coord: 30..256
e-value: 8.8E-28
score: 96.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 340..486
e-value: 1.1E-14
score: 54.0
IPR005828Major facilitator, sugar transporter-likePFAMPF00083Sugar_trcoord: 83..295
e-value: 2.7E-23
score: 82.5
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 47..480
score: 29.094
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 48..476
e-value: 6.17526E-33
score: 126.66
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 33..490

Blast
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BLAST of TCONS_00003636-protein vs. Swiss-Prot (Human)
Match: SVOP (Synaptic vesicle 2-related protein OS=Homo sapiens GN=SVOP PE=2 SV=1)

HSP 1 Score: 352.829 bits (904), Expect = 3.550e-116
Identity = 197/483 (40.79%), Postives = 279/483 (57.76%), Query Frame = 0 
Query:    7 ETESLLQNENVNDDDIEPKGDDYTIEEAIERIGFGKFQLKLLAMVGFAWSADSLEMALLAILAPAVRCEWHLSHYHEAMLTTIVFIGMLIFSYFWGWASDTYGRRKVLIWSTTGVFVFGLVSAFSHTYVMILLLRGGVGASMAGTVQGTTLIVEYLPVAARGLSINVSGIFWSAGTCFEVLSAMYIMPRHGWRVLLFWSAWPCLIFVVATLLSKQPPESVRFLVSKGRQKEAEEILHKAAKENNKEEKLQGNLITLEKEQSEYKHGSFSGLFKRGYWRQTLLLWVMWFASHFNIYGLSLLTTALFSSSYTCYGEPAAKKHETE---NCKPLTQADYLHFFYVLAADFPAILVTAILTDTVGRKWLQAIGFFVMGIFFTLLLLCTSSRNWTTFFLFGVRCFAAVADVGGYIYTPEVYPTEIRGIALGSCSAISRIGAMLTPFVSQVLTHTNLSLSLSIYIGFSIIGGVCSLLLPIETKGKGLEE 486
            E   L     V  +   P  D + +E+A+E IGFGKFQ KL  + G AW AD++EM +L+ILAP + CEW L  +  A+LT++VF+GM+  S  WG  SD YGR+  L  S      +G++SAF+  Y  IL+LRG VG  + G  Q  TL  E+LP+ AR   I +  +FW+ GT FEV+ A+++MP  GWR LL  SA P L+F V   L    PES R+ V  G Q++A   L + A EN     L G LI   +E      G    LF   +   TLLLW +WF++ F+ YGL LLTT LF +   C      K  E +    C+ L++ DY+   +   ++FP +LVT  + D +GRK   A+ F +   F +LLL     RN  T  LF  R F +      Y+YTPEVYPT  R + LG+CS ++R+GA++TPF++QV+  +++ L+L++Y G  ++  + S  LPIETKG+GL+E
Sbjct:   46 EAVELDDGAAVPKEFANPTDDTFMVEDAVEAIGFGKFQWKLSVLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFVGMMSSSTLWGNISDQYGRKTGLKISVLWTLYYGILSAFAPVYSWILVLRGLVGFGIGGVPQSVTLYAEFLPMKARAKCILLIEVFWAIGTVFEVVLAVFVMPSLGWRWLLILSAVPLLLFAV---LCFWLPESARYDVLSGNQEKAIATLKRIATENGAPMPL-GKLIISRQED----RGKMRDLFTPHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCGISSRKKAVEAKCSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFS-FCSLLLFICVGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLESSVYLTLAVYSGCCLLAALASCFLPIETKGRGLQE 519
The following BLAST results are available for this feature:
BLAST of TCONS_00003636-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SVOP3.550e-11640.79Synaptic vesicle 2-related protein OS=Homo sapiens... [more]
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