TCONS_00003624-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00003624-protein
Unique Name	TCONS_00003624-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	396

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00003624-protein ID=TCONS_00003624-protein|Name=TCONS_00003624-protein|organism=Clytia hemisphaerica|type=polypeptide|length=396bp
QEKPLQPLWLSGRLKITHDMKMSNNKKKNNASLMHKEQEFKDLNAALEEK
TASLINDVESVLRGQELFFNDLHSTEKDLSDMSLGTQSIDGTEANTTEDS
LRKPPAKKKLSVKKRPLSGPVTGAKKREMKQNGRPKTSINTIHGKETSPL
NLVSDRAAFADRINTLEMEAADDLYTPSHLNEGVLPEAANELSSDATIRF
LKAKLRVMQEELENVANECRQKASKVTELQSEMKESNMQQTNLLKKNEQL
QKTIEKQKKLQTDLQTKNSDLESDVTSLKKELDGTKRSNKQSSANRNTLE
VRLNRALEEVEKYKQALKKSKESTKAVNDTDRKCLDQLQNENKRLESQKN
DLMIAFKKQLKLIDILKRQKMHIEAAKMLEFTEEEFIRALDWNNTT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002015	XLOC_002015	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00003624	TCONS_00003624	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 33..53
None	No IPR available	COILS	Coil	Coil	coord: 328..355
None	No IPR available	COILS	Coil	Coil	coord: 198..323
None	No IPR available	GENE3D	1.20.5.340		coord: 192..311 e-value: 1.3E-7 score: 30.9
None	No IPR available	GENE3D	1.20.5.400		coord: 312..384 e-value: 0.39 score: 10.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..143

Blast

[Close]

BLAST of TCONS_00003624-protein vs. Swiss-Prot (Human)
Match: TEX9 (Testis-expressed protein 9 OS=Homo sapiens GN=TEX9 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.382e-57
Identity = 138/370 (37.30%), Postives = 218/370 (58.92%), Query Frame = 0

Query:   33 LMHKEQEFKDLNAALEEKTASLINDVESVLRGQELFFNDLHSTE----KDLSDMSLGTQSIDGTEANTTEDSLRKPPAKKKLSVKKRPLSGPVTGAKKREMKQNGRPKTSINTIHGKETSPLNLVSDRAAFADRINTLEMEAADDLYTPSHLNEGVLPEAANELSSDATIRFLKAKLRVMQEELENVANECRQKASKVTELQSEMK---ESNMQQTNLLKKNEQLQKTIEKQKKLQTDLQTKNSDLESDVTSLKKELDGTKRSNKQSSANRNTLEVRLNRALEEVEKYKQALKKSKESTKAVNDTDRKCLDQLQNENKRLESQKNDLMIAFKKQLKLIDILKRQKMHIEAAKMLEFTEEEFIRALDWNNT 395
            L+  E+E+K LNA L+ KTA ++   + ++R ++   +   ST+     D  D SL  + +  +E      S  KP  K    V K  +   +  A K   K N   K   + +   +   +       + A  I+ +E +  ++   P ++++ +    +N++ ++A IRFLKAKL VMQEEL+NV  EC +K  ++  L+S++K   E  M+Q   +  N Q Q  +EK K L  +   K   L+  ++S+++EL+  +R  KQ++++++  EVRLNRALEE EKYK  L K +++ K + + + K ++ L++ENK+LE QK +LMI FKKQLKLID+LKRQKMHIEAAKML FTEEEF++AL+W N+
Sbjct:   32 LLALEEEYKRLNAELQAKTADVVQQAKEIIRDRQEVRSRPVSTQMKSCDDEDDYSL--RGLLPSEGIVHLHSETKPKTKNIDPVNK--VQNKLHSANKGR-KTNSSVKLKYSDVQTADDVAIPEDFSDFSLAKTISKIEGQLEEE-GLPEYIDD-IFSGVSNDIGTEAQIRFLKAKLHVMQEELDNVVCECNKKEDEIQNLKSQVKNFEEDFMRQQRTI--NMQ-QSQVEKYKTLFEEANKKYDGLQQQLSSVERELENKRRLQKQAASSQSATEVRLNRALEEAEKYKLELSKLRQNNKDIANEEHKKIEVLKSENKKLEKQKGELMIGFKKQLKLIDVLKRQKMHIEAAKMLSFTEEEFMKALEWGNS 391

The following BLAST results are available for this feature:

BLAST of TCONS_00003624-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00003624-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TEX9	2.382e-57	37.30	Testis-expressed protein 9 OS=Homo sapiens GN=TEX9...	[more]

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TCONS_00003624-protein (polypeptide) - C. hemisphaerica