TCONS_00003461-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003461-protein
Unique NameTCONS_00003461-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length765

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003461-protein ID=TCONS_00003461-protein|Name=TCONS_00003461-protein|organism=Clytia hemisphaerica|type=polypeptide|length=765bp
MGFKPGMIVWVLLLQILQIQCAAYVDPMIGLETDCTNLNSVLEYKSPGYD
GTNTYPLNKKCGWKMSTVAQEADFSITFHSFDLEYSLRCYDWVHLYKKLD
GDTEWTRTSPAQGYCGALNAFSVTMTGKEVLLVFKSDSSQVHKGFNATAH
FHITASAPQAQKVLDQSNPHGSNLTYQEYDTVTLKCNVSEDIPKASITWL
KLSEPMYVSMPTVNVTVNSTGSIVNVTVANSTMANYTMANFTTTVATTTT
AAFSTDDWDNSTMPSRMVQLQHGNGTLQLHKLQKDDTGYYRCVATNKYGS
SSVDYHMTVLEKCLCPKDIYVGYYYKTPYTRHLDENNQYTGVFYNMLNEM
VDEVCNCTMKPTVHWTGKRNPQNGIIGLHSAIQDEKFDIYLPIKNNKLVN
KYKGYYFLPMFPSPGIAMMMVKDKDEGLVLRIVESSWSVMVIAVLMAMVS
GIIMWMLECPFNPEEFPRKAIGGMIEGCWWAFVTMTTVGYGDIAPISVPG
RSFALVWILIGLVITAILTGVITTGLTSSVMTSSAKIYGTKLGAISNSNE
YFFGARRNGDMQEMGSFARISKDMKSGMIKGALIDAYEASYRTTDFEDFN
VGKIIDDNKVYGIAFGRSMSDSILYDKFENWMEANKGRVLRAVEQNVKSF
KKGDAEALAKSADIFDPASTYFKKSVNTSIYLLIVFIIGGLMWEYIYLRP
RDRMLASANKLELLVSEDGVKQAKFCKVLKGNVLKDVDELKERMANIVTT
KAYVHKQQIKQFHKQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001925XLOC_001925Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003461TCONS_00003461Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000859CUB_dom
IPR003598Ig_sub2
IPR003599Ig_sub
IPR013783Ig-like_fold
IPR013099K_chnl_dom
IPR007110Ig-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000859CUB domainSMARTSM00042CUB_2coord: 35..152
e-value: 9.3E-11
score: 51.7
IPR000859CUB domainGENE3D2.60.120.290coord: 34..154
e-value: 2.7E-16
score: 59.2
IPR000859CUB domainPFAMPF00431CUBcoord: 43..148
e-value: 9.6E-12
score: 45.1
IPR000859CUB domainPROSITEPS01180CUBcoord: 21..152
score: 9.945
IPR000859CUB domainCDDcd00041CUBcoord: 43..148
e-value: 3.2913E-16
score: 74.7562
IPR000859CUB domainSUPERFAMILY49854Spermadhesin, CUB domaincoord: 45..149
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 177..299
e-value: 4.4E-6
score: 36.2
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 171..310
e-value: 3.6E-9
score: 46.5
NoneNo IPR availablePFAMPF13927Ig_3coord: 175..296
e-value: 5.3E-8
score: 33.3
NoneNo IPR availableGENE3D1.10.287.70coord: 433..651
e-value: 7.7E-23
score: 80.1
NoneNo IPR availableGENE3D3.40.190.10coord: 307..432
e-value: 0.01
score: 15.0
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 438..529
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 313..422
coord: 527..636
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 155..306
e-value: 4.9E-18
score: 64.8
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 444..525
e-value: 5.3E-13
score: 48.6
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 158..308
score: 11.424
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 172..310

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003461-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top