TCONS_00003417-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003417-protein
Unique NameTCONS_00003417-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length282

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003417-protein ID=TCONS_00003417-protein|Name=TCONS_00003417-protein|organism=Clytia hemisphaerica|type=polypeptide|length=282bp
QRDFQEERYFGRAMKMNLAFVIAIFASVFLQGDSATTCGVSKVNSRVIAG
QNAKQGQWPWQVALYVKGRFSCGGTLIHPSWLVTAAHCIFAKRQQYKVVL
GELHRNKNSSTEVEIKVRKLIKHPLYQYPSRLNNDIALIKLARPVKLNDD
IAVACLPKPKEQVPEDSKCFISGWGKTKHPGGSAIRLQHAQMKVISNTEC
NKKNSRYNPIEPQMLCAANQNAKQSGCHGDSGGPFVCQGSNGRWALQGAV
SWGSPRCDTTDANTVFARVAEFRDWINKYVKV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001911XLOC_001911Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003417TCONS_00003417Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR018114TRYPSIN_HIS
IPR033116TRYPSIN_SER
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 131..145
score: 44.28
coord: 224..236
score: 57.01
coord: 73..88
score: 57.01
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 46..276
e-value: 6.1E-85
score: 298.2
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 48..276
e-value: 4.2E-65
score: 219.5
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 47..281
score: 34.788
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 47..278
e-value: 1.97421E-92
score: 274.924
NoneNo IPR availableGENE3D2.40.10.10coord: 152..282
e-value: 1.3E-42
score: 144.8
NoneNo IPR availableGENE3D2.40.10.10coord: 78..151
e-value: 3.6E-29
score: 100.2
NoneNo IPR availableGENE3D2.40.10.10coord: 58..77
e-value: 4.4E-19
score: 67.9
NoneNo IPR availableGENE3D2.40.10.10coord: 46..57
e-value: 0.0018
score: 17.5
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 83..88
IPR033116Serine proteases, trypsin family, serine active sitePROSITEPS00135TRYPSIN_SERcoord: 225..236
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 19..280

Blast
[Close]
BLAST of TCONS_00003417-protein vs. Swiss-Prot (Human)
Match: CTRB2 (Chymotrypsinogen B2 OS=Homo sapiens GN=CTRB2 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 7.362e-53
Identity = 100/251 (39.84%), Postives = 138/251 (54.98%), Query Frame = 0 
Query:   38 CGVSKVN------SRVIAGQNAKQGQWPWQVALYVKGRFS-CGGTLIHPSWLVTAAHCIFAKRQQYKVVLGELHRNKNSSTEVEIKVRKLIKHPLYQYPSRLNNDIALIKLARPVKLNDDIAVACLPKPKEQVPEDSKCFISGWGKTKHPGG-SAIRLQHAQMKVISNTECNKKNSRYNPIEPQMLCAANQNAKQSGCHGDSGGPFVCQGSNGRWALQGAVSWGSPRCDTTDANTVFARVAEFRDWINKYV 280
            CGV  ++      SR++ G++A  G WPWQV+L  K  F  CGG+LI   W+VTAAHC    R    VV GE  +  +      +K+ K+ K+P +   + +NNDI L+KLA P + +  ++  CLP   +  P  + C  +GWGKTK+    +  +LQ A + ++SN EC K   R   I   M+CA       S C GDSGGP VCQ  +G W L G VSWGS  C TT    V+ARVA+   W+ K +
Sbjct:   19 CGVPAIHPVLSGLSRIVNGEDAVPGSWPWQVSLQDKTGFHFCGGSLISEDWVVTAAHC--GVRTSDVVVAGEFDQGSDEENIQVLKIAKVFKNPKFSILT-VNNDITLLKLATPARFSQTVSAVCLPSADDDFPAGTLCATTGWGKTKYNANKTPDKLQQAALPLLSNAECKKSWGRR--ITDVMICAGASGV--SSCMGDSGGPLVCQ-KDGAWTLVGIVSWGSRTCSTT-TPAVYARVAKLIPWVQKIL 260
The following BLAST results are available for this feature:
BLAST of TCONS_00003417-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTRB27.362e-5339.84Chymotrypsinogen B2 OS=Homo sapiens GN=CTRB2 PE=2 ... [more]
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