TCONS_00003401-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003401-protein
Unique NameTCONS_00003401-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length109

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003401-protein ID=TCONS_00003401-protein|Name=TCONS_00003401-protein|organism=Clytia hemisphaerica|type=polypeptide|length=109bp
MPHVPDPTVEIEQEDLVYRVERILKSRKRSGITSYLVKWQGYPLSQATWE
PSENILDPNLIVDFNRRTKQKKANKAKAKEKKEGENKRTRKESLNMIVVK
EXKKLEKKA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001896XLOC_001896Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003401TCONS_00003401Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000953Chromo/chromo_shadow_dom
IPR023780Chromo_domain
IPR023779Chromodomain_CS
IPR016197Chromodomain-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000953Chromo/chromo shadow domainSMARTSM00298chromo_7coord: 17..69
e-value: 1.2E-14
score: 64.6
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 18..76
score: 18.006
NoneNo IPR availableGENE3D2.40.50.40coord: 6..91
e-value: 1.2E-20
score: 72.5
NoneNo IPR availableCDDcd00024CHROMOcoord: 17..67
e-value: 1.20233E-12
score: 57.2739
IPR023780Chromo domainPFAMPF00385Chromocoord: 18..67
e-value: 2.8E-15
score: 55.8
IPR023779Chromo domain, conserved sitePROSITEPS00598CHROMO_1coord: 35..55
IPR016197Chromo domain-likeSUPERFAMILY54160Chromo domain-likecoord: 8..72

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003401-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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