TCONS_00003304-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003304-protein
Unique NameTCONS_00003304-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length612

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003304-protein ID=TCONS_00003304-protein|Name=TCONS_00003304-protein|organism=Clytia hemisphaerica|type=polypeptide|length=612bp
MPATSLINSHVTDLDFASREEERFNNFYEDILSLHELLDQIQNISLRRQF
RDIINKVEDDFSNDVDFTTPRCCQYNTLRLGVIGGSLSGKSSLIQRYITG
TNPKEDVMPGKHKKTVTIRGQSNLLLIRDETGPPDYFFSLWADAVVLVFS
LSDEHSFNVISSYYAKMITYRNENTNLLPCILVGIKDDSIINDNLSDGSG
NHPGVAETRVKKFISDHRKCPYFEVSLETGENVNEVFQTGAEKISILQNL
TPGGGTSHDQLMSASFTSLNTLDSERGLGSSFNGSHSSFKKNKRRNTLFS
LNAEKKEKLKEKEKEKDKDKDVTYDDIGSGRSIPIKQGNLYKRSSGSLKE
WKKKFVVVTDDQTFQYYPSMKNYMEDEHVKAFKLIHTTVKTPGKRGSKPS
QSTPHKGHRRSLSTNNLLIPSPSKTPVPPETNQSSECFVISNNIANDTTD
GGLVNMSNGSPTIHHDIPIGRTSSDGKDHGTSNNRATLSQDTYPIKKKYK
HRNKSCELDYHPDTGGXTNTGISHANSIIIRIRAAKYIRTWTGFCFHLPR
PSLKRKHIEDKKALRLQKSQGWMDERQIQRIAIISSRWYIMTVERVTLNA
LLWRIVMHGYQP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001837XLOC_001837Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003304TCONS_00003304Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR011993PH_dom-like
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 295..322
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 222..244
score: 32.9
coord: 176..189
score: 37.65
coord: 78..99
score: 33.79
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 80..248
e-value: 5.0E-4
score: -65.5
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 75..247
e-value: 6.3E-6
score: -24.6
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 78..247
e-value: 8.1E-5
score: -49.6
NoneNo IPR availableGENE3D3.40.50.300coord: 73..249
e-value: 3.3E-18
score: 65.1
NoneNo IPR availablePROSITEPS51419RABcoord: 62..287
score: 10.194
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 82..244
e-value: 7.9E-14
score: 51.5
IPR011993PH domain-likeGENE3D2.30.29.30coord: 329..513
e-value: 6.6E-12
score: 44.8
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 326..396
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 74..243

Blast
[Close]
BLAST of TCONS_00003304-protein vs. Swiss-Prot (Human)
Match: AGAP1 (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 OS=Homo sapiens GN=AGAP1 PE=1 SV=4)

HSP 1 Score: 247.284 bits (630), Expect = 8.145e-72
Identity = 159/434 (36.64%), Postives = 234/434 (53.92%), Query Frame = 0 
Query:   20 EEERFNNFYEDILSLHELLDQIQNISLRRQFRDIINKVEDDFSNDVDFTTPRCCQYNTLRLGVIGGSLSGKSSLIQRYITGTNPKEDVMPG-KHKKTVTIRGQSNLLLIRDETGPPDYFFSLWADAVVLVFSLSDEHSFNVISSYYAKMITYRNENTNLLPCILVGIKDDSIINDNLSDGSGNHPGVAETRVKKFISDHRKCPYFEVSLETGENVNEVFQTGAEKISIL---QNLTPG------GGTSHDQLMSASFTSLNTLDSERGLGS-------------------------SFNGSHSSFKKNKRRNTLFSLNAEKKEKLKEKEKEKDKDKDVTYDDIGSGRSIPIKQGNLYKRSSGSL-KEWKKKFVVVTDDQTFQYYPSMKNYMEDEHVKAFKLIHTTVKTPGKRGSKPSQSTPHKGHRRSLSTNNL 417
            E +RF + + +I S++ELL++++   L+ Q R+ +  +ED F N  ++T  R      L++G++G   SGKS+L+ RY+TGT  +E+   G + KK + + GQS LLLIRDE GPP+  F++W DAV+ VFSL DE SF  +  YY++M  YR  NT+ +P +LVG +D        +  S N   + + R +K  +D ++C Y+E     G NV  VFQ  A+KI      Q L+ G         SH  + SA  ++++   +  G GS                         + N      K++KRR+ LF+       K  + +KEK K  +   D IGSGR+IPIKQG L KRS  SL KEWKKK+V + D+    Y+PS+ +YM++ H K   L+ TTVK PGKR   P ++T       S  TN L
Sbjct:   16 EIQRFESVHPNIYSIYELLERVEEPVLQNQIREHVIAIEDAFVNSQEWTLSR--SVPELKVGIVGNLASGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSYLLLIRDEGGPPEAQFAMWVDAVIFVFSLEDEISFQTVYHYYSRMANYR--NTSEIPLVLVGTQD--------AISSANPRVIDDARARKLSNDLKRCTYYETCATYGLNVERVFQDVAQKIVATRKKQQLSIGPCKSLPNSPSHSSVCSAQVSAVHISQTSNGGGSLSDYSSSVPSTPSTSQKELRIDVPPTANTPTPVRKQSKRRSNLFT-----SRKGSDPDKEK-KGLESRADSIGSGRAIPIKQGMLLKRSGKSLNKEWKKKYVTLCDNGVLTYHPSLHDYMQNVHGKEIDLLRTTVKVPGKR---PPRATSACAPISSPKTNGL 428
The following BLAST results are available for this feature:
BLAST of TCONS_00003304-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGAP18.145e-7236.64Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
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