TCONS_00003227-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003227-protein
Unique NameTCONS_00003227-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length129

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003227-protein ID=TCONS_00003227-protein|Name=TCONS_00003227-protein|organism=Clytia hemisphaerica|type=polypeptide|length=129bp
GLSSIDIEDGAFNVNYLNLERNNITSVRKEWFVSIPGWIDLRYNPLTCDC
VLYDTLNRFQKEGLDVQNIKGSCDIDGVSLKVFHTENKLNCSSCSVNKCQ
NNEKCQVIDQFSYNCSCEEKYHGEFCQFE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001787XLOC_001787Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003227TCONS_00003227Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675L_dom-like
IPR013032EGF-like_CS
IPR000742EGF-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 2..71
e-value: 2.6E-4
score: 18.8
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 9..72
NoneNo IPR availableGENE3D2.10.25.10coord: 82..129
e-value: 1.8E-6
score: 27.4
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 87..128
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 115..126
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 90..127
score: 11.392

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003227-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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