TCONS_00003171-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003171-protein
Unique NameTCONS_00003171-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length603

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003171-protein ID=TCONS_00003171-protein|Name=TCONS_00003171-protein|organism=Clytia hemisphaerica|type=polypeptide|length=603bp
SEPDDSVTDDDKKKLEKSKLVTKIPKVGKQWAVSFDVKQIAKAPGWTNII
HLSARENCCQVGDRVPAVWFWADSSKLHICFPVDDQGNTCFNKVIDSGKF
VTVSIEQRKYESKYKTVVTIAGEQVYTKEHKTEPKEFSDVKLWAADPWHN
AANAEIQNLEFKNIEDDDDDDKEDAKEEEEQKEEEEKPKPGPKPAEPPAP
KPQPIKWVCINKMTPWNDEGKGKSFYLDRHNVRCDGDQVLKRFKLGRNGK
GKYKYDYKCCDPQMKASVTKETETPLNADGGGNMVYLDRHAIDCGNGLIS
QYKLNRNGGKIQYKYTCKMFTGKRSCYDGSTPMNLDGGGNTVYLDRHNVR
CKVNYGLSFFKLYRNDKRNRVAYKYRCCTFLNKVVKPDEDKPEPPAPAPP
PADADAEMAKYLDGQIISLKSFHNKIVAAEKDGSATANRKNVGAWEKFKV
QVVSGSKIGIMSLQWKKYLVAEANGEVNANRPKLGGWETFDVEKVSDTKI
GLKTAHGKYVIAFPNGQLKGTAKARKSWEEFEVGFPDGRKGDDEGDKDKE
DPGKVPDPDQEEPEPEKKDDSIGREEETKLEKNKIVGTIPKVNKEWSLSF
DIX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001756XLOC_001756Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003171TCONS_00003171Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008999Actin_cross-linking
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 165..185
NoneNo IPR availableGENE3D2.80.10.50coord: 404..479
e-value: 1.3E-14
score: 54.2
NoneNo IPR availableGENE3D2.80.10.50coord: 480..541
e-value: 9.7E-13
score: 47.8
IPR008999Actin cross-linkingSUPERFAMILY50405Actin-crosslinking proteinscoord: 416..533

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003171-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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