TCONS_00003166-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003166-protein
Unique NameTCONS_00003166-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length879

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003166-protein ID=TCONS_00003166-protein|Name=TCONS_00003166-protein|organism=Clytia hemisphaerica|type=polypeptide|length=879bp
MRRSTTVYWFLVCNLLVLVQCNDSHLEVTFDGTQYIEKSMLVQPTHQKTN
ELNMIFRTSISSGLLFYASGVTGDYIVLELVHGKLRYTANSDGLSTESRP
VEIIYGENFADGQYHQVNVQIGEYTKLYTYSQNQNLNQTVVRSFAKDLRY
DLDEITYYAGLPIKQRPITKDVIMSKTNFRGCINIITFNKKALKLLPSDL
KAKNSDITFHGKYIKGCNIDKPIFLKSFKSSKDQLEIYSHVNRNMFRAEF
YYRTYLQTGNILISRRSTKASSLSLTMKDNKLQLLVNVTKKDSISIGHFD
ANADDGVWRKIQIHITPKEIVFGIGEITTRYQFNSSKLVLDFPNKIVFGG
EYESKPGFTGCIKDVYLGNELTTIAKVMNLGTDLIYEEEQCKMKDFCLPN
QPCANKGRCIQKPTKAVCDCQGTGFTGTFCQKPNSHQYQSSCTGFFKQGY
RDNGIFVIKPGHSKPFEVYCDMKNKDGPKTIIKTNIGDKKYVFKSESYDK
DYHYHQVTYEATKSQIADLITASQTCRQYVRYDCIASTLLNTYYKTERSS
SLGLRWYSRKGFPRHYWHGDSKTASKKSCRCGLDGSCIRTDVLCNCDVRD
QKFHYDDGFISEKDDLPISKIRVSIQRTNPRSSFHIGDLECSDNVNISNI
IPSYVPDLATDKNGVVLHEPTTPYSNQTEIDVSKKKTKNFVLIDTKLLYG
IIIAVILLISLLLLILILKRRLCCCYYENKAKPQIVEIYKDVDMAHRNNN
KNSFQLADDSSAHFKVSDVTLSVKRGMSSSYPVSNSESSVSTIDPSRYYQ
HNISDSDTLSLHQSIIPPEPPVRTTLKIKKELAQKRQSDGSQLSSSSETS
VAKNNNKSTTPPSXXXXXHIATTIKIVFN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001752XLOC_001752Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003166TCONS_00003166Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001791Laminin_G
IPR014716Fibrinogen_a/b/g_C_1
IPR000742EGF-like_dom
IPR002181Fibrinogen_a/b/g_C_dom
IPR013320ConA-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001791Laminin G domainSMARTSM00282LamG_3coord: 48..191
e-value: 8.7E-12
score: 55.2
coord: 244..370
e-value: 4.8E-6
score: 36.1
IPR001791Laminin G domainPFAMPF02210Laminin_G_2coord: 56..190
e-value: 2.6E-15
score: 57.0
coord: 253..369
e-value: 2.8E-10
score: 40.7
IPR001791Laminin G domainPROSITEPS50025LAM_G_DOMAINcoord: 222..391
score: 19.923
IPR001791Laminin G domainPROSITEPS50025LAM_G_DOMAINcoord: 25..217
score: 26.468
NoneNo IPR availableGENE3D2.60.120.200coord: 227..394
e-value: 1.3E-16
score: 60.6
NoneNo IPR availableGENE3D2.10.25.10coord: 395..433
e-value: 5.0E-7
score: 29.0
NoneNo IPR availableGENE3D2.60.120.200coord: 17..222
e-value: 5.6E-22
score: 77.7
NoneNo IPR availableCDDcd00054EGF_CAcoord: 395..431
e-value: 1.48815E-4
score: 39.5422
NoneNo IPR availableCDDcd00110LamGcoord: 28..189
e-value: 1.32769E-16
score: 77.0732
NoneNo IPR availableCDDcd00110LamGcoord: 239..367
e-value: 5.16236E-10
score: 57.4281
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 434..571
e-value: 1.1E-8
score: 34.6
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 393..431
score: 14.954
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 429..566
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 16..203
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 228..380

Blast
[Close]
BLAST of TCONS_00003166-protein vs. Swiss-Prot (Human)
Match: CNTP2 (Contactin-associated protein-like 2 OS=Homo sapiens GN=CNTNAP2 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 2.140e-50
Identity = 160/620 (25.81%), Postives = 279/620 (45.00%), Query Frame = 0 
Query:   56 FRTSISSGLLFYASGVTGDYIVLELVHGKLRYTAN--SDGLSTESRPVEIIYGENFADGQYHQVNVQIGEYTKLYTYSQNQNLNQTVVRS---FAKDLRYDLDEITY---YAGLPIKQRPITKDVIMSKTNFRGCINIITFNKKALKLLPSDLKAKNSDITFHGKYIKGCNIDKPIFLKSFKSSKDQLEIYSHVNRNMFRAEFYYRTYLQTGNILISRRSTKASSLSLTMKDNKLQLLVNVT--KKDSISIGHFDANADDGVWRKIQIHITPKEIVFGIGEITTRYQFNSSKLVLDFPNKIVFGGEYES---------KPGFTGCIKDVYLGNELTTIAKVMNL--GTDLIYEEEQCKMKDFCLPNQPCANKGRCIQKPTKAVCDCQGTGFTGTFCQKPNSHQYQSSCTGFFKQGYRDNGIFVIKP---GHSKPFEVYCDMKNKDGPKTIIKTNIGDKKYVFKSESYDKD-YHYHQVTYEATKSQIADLITASQTCRQYVRYDCIASTLLNTYYKTERSSSLGLRWYSRKGFPRHYWHGDSKTASKKSCRCGLDGSCIRTDVLCNCDVRDQKFHYDDGFISEKDDLPISKIRVS-IQRTNPRSSFHIGDLECSDNVNISN 649
            F+TS S G++ +  G  GDYI LEL   KL  + N  S+ L        ++ G    D  +H V ++           Q +++N T+ RS   F  +  +D  ++ Y   + G+P   +P +     S+ NF+GC+  I +N   +  L    K + S++   G     C   +P  +  F ++   LE+   +N+++F   F +RT+   G ++ S  +    ++ + + ++K+ + +N+T  K   I I    +  +DG W +++        +  I          +S L +    K  FGG             +P F GC++ + + ++L  + +V     G+      + C + D C+PN  C + G+C Q      C C  TG++G  C    +  Y+ SC  +   G   N  + I P   G   P +VYC+M  +D   TI+  ++  +  V     Y+ + Y   Q+ Y A+  QI+ +  +++ C QYV Y C  S LLNT   +  +      W+  K   +HY+ G S    +K C CG++ +C      CNCD   +++  D GF+S KD LP+S++ V    R    +   +G L C  + N  N
Sbjct:  216 FKTSESEGVILHGEGQQGDYITLELKKAKLVLSLNLGSNQLGPIYGHTSVMTGSLLDDHHWHSVVIE----------RQGRSINLTLDRSMQHFRTNGEFDYLDLDYEITFGGIPFSGKPSSS----SRKNFKGCMESINYNGVNITDLARRKKLEPSNV---GNLSFSCV--EPYTVPVFFNATSYLEVPGRLNQDLFSVSFQFRTWNPNGLLVFSHFADNLGNVEIDLTESKVGVHINITQTKMSQIDISS-GSGLNDGQWHEVRFLAKENFAILTIDGDEASAVRTNSPLQVKTGEKYFFGGFLNQMNNSSHSVLQPSFQGCMQLIQVDDQLVNLYEVAQRKPGSFANVSIDMCAIIDRCVPNH-CEHGGKCSQTWDSFKCTCDETGYSGATCH---NSIYEPSCEAYKHLGQTSN-YYWIDPDGSGPLGPLKVYCNM-TEDKVWTIVSHDLQMQTPVV---GYNPEKYSVTQLVYSASMDQISAITDSAEYCEQYVSYFCKMSRLLNTPDGSPYT------WWVGKANEKHYYWGGSGPGIQK-CACGIERNCTDPKYYCNCDADYKQWRKDAGFLSYKDHLPVSQVVVGDTDRQGSEAKLSVGPLRCQGDRNYWN 799
The following BLAST results are available for this feature:
BLAST of TCONS_00003166-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CNTP22.140e-5025.81Contactin-associated protein-like 2 OS=Homo sapien... [more]
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