TCONS_00003164-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003164-protein
Unique NameTCONS_00003164-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length184

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003164-protein ID=TCONS_00003164-protein|Name=TCONS_00003164-protein|organism=Clytia hemisphaerica|type=polypeptide|length=184bp
NLSHYLKFFELALSIIFTIGYGRTVAKSMLGKCLVMTYATFSIPITTASV
VFCGRFITAVIKYFVISFESRVLKHNKITKFQRKVTSIIVMLNTLVILML
ALLYHMTSLQNHGFFEAFYFTFISLTTIGFGDTEFDLNFVENLNVAETCL
FIALDWLLFYSSYSMLASLIGMAVSFETERPTKS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001751XLOC_001751Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003164TCONS_00003164Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0032802pore_dom_K_chnl
IPR013099K_chnl_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005267potassium channel activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0071805potassium ion transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071805 potassium ion transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0005267 potassium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003280Two pore domain potassium channelPRINTSPR013332POREKCHANELcoord: 14..42
score: 33.11
coord: 126..135
score: 61.28
NoneNo IPR availableGENE3D1.10.287.70coord: 71..176
e-value: 2.9E-9
score: 35.9
NoneNo IPR availableGENE3D1.10.287.70coord: 1..63
e-value: 4.8E-7
score: 29.0
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 78..168
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 13..64
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 95..152
e-value: 1.3E-8
score: 34.6
coord: 12..58
e-value: 3.1E-5
score: 23.8

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003164-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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