TCONS_00003149-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003149-protein
Unique NameTCONS_00003149-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1208

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003149-protein ID=TCONS_00003149-protein|Name=TCONS_00003149-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1208bp
MQVHESFQHSNDPNLILQKFTKIFPTDVANIRCQIYYPYIRNCPEDQYRE
LVRQLFELNKNVNDKYGYLDFKDLLHKNQVTPINDILSALNILEIYAKNL
LKNETERHKHWNKINLMTKAFETVRPLLGNRDILYQMGYTKDLKDTSGSL
RGVAFPEGTPPNTDKVEHLAMDLYIAKCEIKEINNRTHPRLHWLKDLDGL
PSAFFINNDTSDPSTESIPYLLPNSTSSSTARKFNDLTSMQIQKPEIPAR
PKLSYPETETRNVTTTKEAPKLRKCPKCGNQGTKFCQECGSDLSKLTITE
VNNKPSTPVIDQQPQAWTAKLEPPNNRKTIALYEEPSPKGSPVLTPKFQT
PPQSPRQLRQMIDAEDVVEQKPPLNDEKPPAAGERWVCKHCTFENEPTTN
ICDVCLKTSWVFKPTEIKAKEQTQPPPPEQRRHVEQPPPPQPAPRQGKNE
QSNSQKKGLSMLTNFFGMKSDEEKQDGFSPNHSTLKAKDIESFVVIEDHF
NGSAANTGENNKSNDQQDGRNFHTTPLINGAKNDETLTKAGLKPIVKSSV
EYQQIRKNLEKKKEEDRQRAAEEERQRIIEKEKQQKSEQKSKHLARLFQY
SEQNGFTVDECVIAIKRGKFGPSPSTQQIHNYFNTGQNTDINEIVLLCNA
ELYNQKLGAVSAEEARPFYMKIGLDRDENILEEAAKALIQRRTKQVAMLK
NEFTSLPQDDIVNALTQAKGSMERARTSLNKFLLKDIVARSKNPFDEKKF
IDQMNNDKIDRELKCVILLGEGYVENWGKAELVCRLTTEFKDNEDVEVFD
CIEAANSSKDIDKCRRYLQHDCSICYGKYPMNKIEQSTTCHCKLCIDCYT
QFLKTSIESKDISNLKCSGCEEDIVFPHLAEQIKHFVRKKRLEQKYLDIF
QTKLLDFGIQNDPSFRYCVHCNNGYGFIWDNDMGIKMRCDKCNQFSCYNC
KEKWTSDHDGVTCDELEFVRYMNNNLGKEKDVASLFDRTQVVCPNQVCKS
KFELARGGCMHFTCPKCKFQFCNGCDGQMVDSKKGETTEKCDDRCATKGL
HAHHPRDCYFYVRDLVIDELQQILKNGEIPYETEPAEDRQDQAIVCNVKE
TKEEDYVDANGENKKRTVDTPCGKETENHNAGLCLVHYKEYLSILINRYG
LDPVEVYDKNSLRILYNXAWIQSKFTIKTVSVSFTMSGTIKKCRPNRTGK
TKMLMCNA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001744XLOC_001744Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003149TCONS_00003149Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002867IBR_dom
IPR001876Znf_RanBP2
IPR018997PUB_domain
IPR032065RNF31-UBA
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 545..589
NoneNo IPR availableGENE3D2.20.25.20coord: 991..1045
e-value: 2.0E-4
score: 21.1
coord: 917..967
e-value: 0.0031
score: 17.3
NoneNo IPR availableGENE3D4.10.1060.10coord: 374..454
e-value: 4.3E-5
score: 22.3
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 820..879
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 906..966
IPR002867IBR domainSMARTSM00647ibrneu5coord: 898..963
e-value: 6.3E-5
score: 32.4
IPR002867IBR domainPFAMPF01485IBRcoord: 900..963
e-value: 1.6E-6
score: 28.2
coord: 987..1027
e-value: 1.7E-5
score: 24.8
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 384..408
e-value: 0.0029
score: 26.8
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 386..405
IPR001876Zinc finger, RanBP2-typeSUPERFAMILY90209Ran binding protein zinc finger-likecoord: 383..406
IPR018997PUB domainPFAMPF09409PUBcoord: 85..157
e-value: 4.0E-5
score: 23.4
IPR032065E3 ubiquitin-protein ligase RNF31, UBA-like domainPFAMPF16678HOIP-UBAcoord: 590..738
e-value: 3.9E-9
score: 36.6

Blast
[Close]
BLAST of TCONS_00003149-protein vs. Swiss-Prot (Human)
Match: RNF31 (E3 ubiquitin-protein ligase RNF31 OS=Homo sapiens GN=RNF31 PE=1 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 1.269e-71
Identity = 184/596 (30.87%), Postives = 285/596 (47.82%), Query Frame = 0 
Query:  580 EKEKQQKSEQKSKHLARLFQYSEQNGFTVDECVIAIKRGKFGPSPSTQQIHNYFNTGQNTDINEIVLLCNAELYNQK---LGAVSAEEARPFYMKIGLDRDENILEEAAKALIQRRTKQVAMLKNEFTSLPQDDIVNALTQAKGSMERARTSLNKFLLKDIVARSKNPFDEKKFIDQMNNDKIDRELKCVILLGEGYVENWGKAELVCRLTTEFKDNEDVEVFDCIEAANSSKDIDKCRRYLQHDCSICYGKYPMNKIEQSTTCHCKLCIDCYTQFLKTSIESKDISNLKCSGCEEDIVFPHLAEQ---IKHFVR-----KKRLEQKYLDIFQTKLLDFGIQNDPSFRYCVHCNNGYGFIWDNDMGIKMRCDKCNQFSCYNCKEKWTSDHDGVTCDELEFVRYMNNNLGKEKDVASLFDRTQVVCPNQVCKSKFELARGGCMHFTCPKCKFQFCNGCDGQMVDSKKGETTEKCDDRC-ATKGLHAHHPRDCYFYVRDLVIDELQQILKNGEIPYETE-PAEDRQDQAIVCNVKETKEEDYVDANGENKKRTVDTPCGKETENHNAGLCLVHYKEYLSILINRYGLDPVEVYDKNSL 1162
            EK++Q K  ++   L  + +  E  G   +E   A++        S  ++   +   +   + E+V    AEL  Q+   LGA S +EAR    +  LDR  N L+EA +  ++ R ++V  L++     P++  + AL Q  G + RA T L +  L+    R  +   E       + D  D++     LL    + +WG+AEL   L  E   N   E+ D +EA   S+D    RR L  +C++C    P N+++  T+C C +C DC+ Q    +++ K I+++ C  C      P L +    + +F       ++ LE     +F  KL +  +  DP F +C  C+  +GFI++ +  ++  C +C+Q  C  CK +W   H G +C++ +  + MN+   + + +A       + CP   CK  + LARGGCMHF C +C+ QFC+GC        K       +  C   K LH HHPRDC FY+RD     LQ++L++  + + TE PA  R      C V E KE      NG       D  CGKET    AGLC  HYKEYL  LIN + LDP  +Y+   L
Sbjct:  477 EKQRQDKMREEGLQLVSMIREGEAAGACPEEIFSALQY-------SGTEVPLQWLRSELPYVLEMV----AELAGQQDPGLGAFSCQEAR----RAWLDRHGN-LDEAVEECVRTRRRKVQELQS-LGFGPEEGSLQALFQHGGDVSRALTELQRQRLEPFRQRLWDSGPEPT----PSWDGPDKQSLVRRLLAVYALPSWGRAELALSLLQETPRN--YELGDVVEAVRHSQDRAFLRRLLAQECAVCGWALPHNRMQALTSCECTICPDCFRQHFTIALKEKHITDMVCPACGR----PDLTDDTQLLSYFSTLDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLWCAQCS--FGFIYEREQ-LEATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMNDPEYQAQGLAMYLQENGIDCPK--CKFSYALARGGCMHFHCTQCRHQFCSGCYNAFYAKNKCP-----EPNCRVKKSLHGHHPRDCLFYLRDWTALRLQKLLQDNNVMFNTEPPAGARAVPGGGCRVIEQKEV----PNGLR-----DEACGKETPAGYAGLCQAHYKEYLVSLINAHSLDPATLYEVEEL 1026
The following BLAST results are available for this feature:
BLAST of TCONS_00003149-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RNF311.269e-7130.87E3 ubiquitin-protein ligase RNF31 OS=Homo sapiens ... [more]
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