TCONS_00002859-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002859-protein
Unique NameTCONS_00002859-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length310

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002859-protein ID=TCONS_00002859-protein|Name=TCONS_00002859-protein|organism=Clytia hemisphaerica|type=polypeptide|length=310bp
MHHSDSVRSYFDEGTEENENKQHKYQFNVNDINRKEEKIQNAELHLFKQY
QPNGQGRPRSAMIQIDIINMHNERVISSRIVSVHVHGWLRFPVTKIVKRW
VRKRKNNKGLQVRIRNIGDDKNNVKFGTKNTLRREPMLVVFTKRVKGSSL
AALLNGNGLNILQNNEKKKRVKRTIVTMNDDKPNNHIEHHHKDGHLECQL
KPLRINTRNMGFGENIINPTEININQCVGSCPARIKEDFLNNRHTSHAIF
QAIVADSSRPGATHDQPALPCCSPSEFKDEVMIISGRKGSQELIQLVKFE
KLIATKCACL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001556XLOC_001556Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002859TCONS_00002859Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001839TGF-b_C
IPR029034Cystine-knot_cytokine
IPR001111TGF-b_propeptide
Vocabulary: Molecular Function
TermDefinition
GO:0008083growth factor activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008083 growth factor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001839Transforming growth factor-beta, C-terminalSMARTSM00204TGFB_2coord: 198..310
e-value: 9.1E-8
score: 28.6
IPR001839Transforming growth factor-beta, C-terminalPFAMPF00019TGF_betacoord: 197..309
e-value: 3.9E-16
score: 59.7
IPR001839Transforming growth factor-beta, C-terminalPROSITEPS51362TGF_BETA_2coord: 170..310
score: 19.059
IPR029034Cystine-knot cytokineGENE3D2.10.90.10coord: 183..310
e-value: 2.7E-18
score: 66.0
IPR029034Cystine-knot cytokineSUPERFAMILY57501Cystine-knot cytokinescoord: 192..309
IPR001111TGF-beta, propeptidePFAMPF00688TGFb_propeptidecoord: 3..130
e-value: 1.0E-15
score: 58.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Blast
[Close]
BLAST of TCONS_00002859-protein vs. Swiss-Prot (Human)
Match: BMP4 (Bone morphogenetic protein 4 OS=Homo sapiens GN=BMP4 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 6.635e-17
Identity = 80/333 (24.02%), Postives = 148/333 (44.44%), Query Frame = 0 
Query:    4 SDSVRSYFDEGTEEN-----ENKQHKYQFNVNDINRKEEKIQNAELHLFKQYQPNG----QGRPRSAMIQI-----DIINMHN-ERVISSRIVSVHVHGWLRFPVTKIVKRWVRKRKNNKGLQVRIRNIGDDKN----------NVKFGTKNTLRREPMLVVFTKRVKGSSLAALLNGNGLNILQNNEKKKRVKRTIVTMNDDKPNNHIEHHHKDGHLECQLKPLRINTRNMGFGENIINPTEININQCVGSCPARIKEDFLNNRHTSHAIFQAIV--ADSSRPGATHDQPALPCCSPSEFKDEVMIISGRKGSQELIQLVKFEKLIATKCAC 309
            +++VRS+  E   EN     EN   ++ FN++ I  + E I +AEL LF++    G    +G  R  + ++     +++  H   R++ +R+V  +V  W  F V+  V RW R+++ N GL + + ++   +           ++  G+ N  +  P+LV F    +G +L                +++R KR+        P +H +   K     C+   L ++  ++G+ + I+ P       C G CP  +  D LN+  T+HAI Q +V   +SS P A        CC P+E     M+        + + L  +++++   C C
Sbjct:  114 ANTVRSFHHEEHLENIPGTSENSAFRFLFNLSSIP-ENEVISSAELRLFREQVDQGPDWERGFHRINIYEVMKPPAEVVPGHLITRLLDTRLVHHNVTRWETFDVSPAVLRWTREKQPNYGLAIEVTHLHQTRTHQGQHVRISRSLPQGSGNWAQLRPLLVTFGHDGRGHALT---------------RRRRAKRS--------PKHHSQRARKKNK-NCRRHSLYVDFSDVGWNDWIVAPPGYQAFYCHGDCPFPLA-DHLNS--TNHAIVQTLVNSVNSSIPKA--------CCVPTELSAISMLY---LDEYDKVVLKNYQEMVVEGCGC 407
The following BLAST results are available for this feature:
BLAST of TCONS_00002859-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BMP46.635e-1724.02Bone morphogenetic protein 4 OS=Homo sapiens GN=BM... [more]
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