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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00002850-protein ID=TCONS_00002850-protein|Name=TCONS_00002850-protein|organism=Clytia hemisphaerica|type=polypeptide|length=693bp
MLATMTCQKLLSLCITLTVLFCLCQARDGDDVVAYISEGDIKGSFHFEQY
NSTIVKITIKLSYDGVDNKLYRIHQHPSNYQQKCKHLGERIFDMDSIKGH
LGKEETLYVDANKISLHGKNSIQGRSISVALSSNTSKILACGTLVSKGIE
NSYAVASISNSKIAGKFEFVQQGLNGDTMITGEISHSDRSTVATDNHKWY
ILGSTEPEEWVANCQTHMNWTQVFDSDRMSQSGCNSTDAKTCAIGDLTGK
HGTLDVGVAGDKKLTVIDSNLPLFGEGDNNVKQHVFVILEQGSNDKVLGC
GIIKPKGPFKAVSTFVADKNSGVSGTVEFEQISPYHRTYFVVNLKGLDER
AKGYHVHKFPISDSSNPCSGASVGGHLNPWGINPSNSPKPGTGPMDKYEA
GDLSGKFGNLANKTDYELKIYDENLPMFGHHALVGRSIVIHNNDASNSRM
TCANIIPHQGVKIESWTNFTKQSDLFDGYVQLVQYVLPNGIVTPTMYIID
VVYQDNPTSRKTLKHNFHVHVKPLGNDTQANGTCMSVGGHYNPNSVDVGN
DVYKEQCDQDHPYRCEVGDTSAKVGTYDVGYGKRFYCDEDSPLYGPHTVL
GRSIVFHAKEMGAPRLACADVVPVEGSMVKKHTVEGSKKIVDSNRGASMV
DILLEKFGLPQSEDWRFGYPRLEDGSNNKECYSFSFYMLDSKF Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001424 | SOD_Cu_Zn_dom |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006801 | superoxide metabolic process |
| GO:0055114 | oxidation-reduction process |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055114 |
oxidation-reduction process |
| biological_process |
GO:0006801 |
superoxide metabolic process |
| molecular_function |
GO:0046872 |
metal ion binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001424 | Superoxide dismutase, copper/zinc binding domain | PFAM | PF00080 | Sod_Cu | coord: 504..610
e-value: 9.6E-9
score: 35.5
coord: 320..455
e-value: 1.9E-16
score: 60.4 |
| IPR001424 | Superoxide dismutase, copper/zinc binding domain | GENE3D | 2.60.40.200 | | coord: 467..633
e-value: 1.3E-21
score: 76.7
coord: 24..148
e-value: 7.7E-5
score: 22.2
coord: 311..466
e-value: 1.1E-29
score: 102.9
coord: 149..310
e-value: 2.7E-12
score: 46.4 |
| IPR001424 | Superoxide dismutase, copper/zinc binding domain | SUPERFAMILY | 49329 | Cu,Zn superoxide dismutase-like | coord: 499..622 |
| IPR001424 | Superoxide dismutase, copper/zinc binding domain | SUPERFAMILY | 49329 | Cu,Zn superoxide dismutase-like | coord: 311..456 |
| IPR001424 | Superoxide dismutase, copper/zinc binding domain | SUPERFAMILY | 49329 | Cu,Zn superoxide dismutase-like | coord: 154..304 |
| IPR001424 | Superoxide dismutase, copper/zinc binding domain | SUPERFAMILY | 49329 | Cu,Zn superoxide dismutase-like | coord: 33..144 |
Blast
The following BLAST results are available for this feature:
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