TCONS_00002821-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002821-protein
Unique NameTCONS_00002821-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length697

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002821-protein ID=TCONS_00002821-protein|Name=TCONS_00002821-protein|organism=Clytia hemisphaerica|type=polypeptide|length=697bp
MDKETAIKAQLGQNLKRFILPANSQFEDLSKMLNTLFKDEIATIKYVDEE
NELITMSTHEELSEAIKSLHKTGNVLKLHINHSEEQKFDKMESSHQAKQQ
VQRQESKVKSKQSTDKGRKSSIPHKIESASKLSKDIELIDSEVTGRIPVP
SPALKCKLDNHFISQQPGRRKLRRLSSTKSEPRKRKSRFSRNSHESSSSS
SSSSSSSSSSSSSSSSSSSSSDSSSEDEDTKRPKRPSSPSLAFNKMLTKF
EKRIHERFSEELQEFSRTLKHDIISTLSQQLNGAVIDVVKTNHNASTQDD
VSDLLDSSSLRGSEFSSTSNKTKYHHRNVICDHCENEIVGPRYKCGNCSD
YDLCETCEGIDGIHIPSHVFLKLHYPSNHAGRKSYWDAPKPLLNTNVYEE
RETEREKDDLLQRKLDSGSELNPKSLEKKIEKHKMKMNEAKRKKEAHETR
KEEWKKVRKELKKNKREINRKLKLARMKKNNQLEIRGVQELTLSPSPGDT
SDFSFIQRSTDTSSLQDENVMTALAGLKIVQLPTHELSSTTVMTQEENYV
EVEHQSLGGEDIENVSDHQDMFLTEPEEEQADDAPLLHERTEFIKTNIGN
FEDVPPHSSTSISPTSLPDTFTNEENQDDVSSTTSDDFIVVSKVFDLSTP
LDEDEIRKRLKYEFVDHMGDLSDVVGPSAFSMHVNEKMNRTEXGPYG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001538XLOC_001538Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002821TCONS_00002821Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000433Znf_ZZ
IPR000270PB1_dom
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 430..478
NoneNo IPR availableGENE3D3.10.20.90coord: 4..83
e-value: 8.6E-16
score: 57.5
NoneNo IPR availableCDDcd02340ZZ_NBR1_likecoord: 329..373
e-value: 4.00126E-19
score: 81.1521
NoneNo IPR availableCDDcd05992PB1coord: 7..80
e-value: 5.91832E-10
score: 55.7469
NoneNo IPR availableSUPERFAMILY54277CAD & PB1 domainscoord: 2..84
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 324..378
IPR000433Zinc finger, ZZ-typeSMARTSM00291zz_5coord: 325..366
e-value: 1.1E-9
score: 48.2
IPR000433Zinc finger, ZZ-typePFAMPF00569ZZcoord: 326..358
e-value: 4.1E-9
score: 36.0
IPR000433Zinc finger, ZZ-typePROSITEPS01357ZF_ZZ_1coord: 331..357
IPR000433Zinc finger, ZZ-typePROSITEPS50135ZF_ZZ_2coord: 325..358
score: 12.118
IPR000270PB1 domainSMARTSM00666PB1_newcoord: 4..83
e-value: 4.0E-8
score: 43.0
IPR000270PB1 domainPFAMPF00564PB1coord: 6..82
e-value: 2.3E-10
score: 40.1
IPR000270PB1 domainPROSITEPS51745PB1coord: 4..83
score: 16.188

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002821-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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