TCONS_00002801-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002801-protein
Unique NameTCONS_00002801-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length890

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002801-protein ID=TCONS_00002801-protein|Name=TCONS_00002801-protein|organism=Clytia hemisphaerica|type=polypeptide|length=890bp
MSDEPGTPERRGGESPRTGVVTSSPGRDDLAPFEDETDALLGNEAPDEEE
GDGEELFGDDMENDYRPIPQLDTYDQSILDDEDQSELSVDGRVEAERAMR
KRDREDGFAGGRMRRGLLYDESEEDEAAEPTASRRRRMAAERAAEREYAD
DDDEMIESIENLEDMKGHSVREWVSLAAPRLEIKNRFKQFLKTFCDERGE
NVYRTKIKQMCENNKQSLTVDYNTLANEHQVLAYFLPEAPAEMLKIFDEA
AKEVVLSMFKNYERIAPDIHVRVSELPLMEDLRSLRQLHLNQLIRTGGVV
TCSSGILPQLNMVKYDCVKCRFVLGPFFQGQNQELKPGSCPQCQSRGPFE
INMEQTLYQNYQKIKIQESPSKVAAGRLPRSKDVVLLADLVDACKPGDEI
EVTGIYRNNYDGSLNTANGFPVFATVIEANHVTKQDDKMAVTNLTDEDVR
EIIKLSKDEKIADRIMASIAPSIYGHDDIKRGIALALFGGVPKNPGGKHK
LRGDINILLCGDPGTAKSQFLKYLEKTAIRPVFTTGQGASAVGLTAYVQR
HPVTKEWTLEAGALVLADRGVCLIDEFDKMNDADRTSIHEAMEQQSISIS
KAGIVTSLQARCSIIAAANPIGGRYDASLTFAENVDLTEPILSRFDILCV
VRDVVDPVQDEMLARFVVGSHVRHHPNGLEDEEEEDKEEENTAGESKVEQ
LSQEMLKKYIIYAKDKVTPNLLNMDQDKVSKMFASLRRESMITGSIPITV
RHIESMIRMSEAHARMHLREYVHEDDVNMAIRVMLESFIDTQKFSVMRNM
KKTFASYLSFKRDNNELLLFVLKQLVRDQVSYYKNRYRSEPDIIEIEEED
FMERARQINIHSLATFYESPLFTSNRFTHDKKRKCVIQNL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001527XLOC_001527Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002801TCONS_00002801Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001208MCM_dom
IPR008045MCM2
IPR031327MCM
IPR027925MCM_N
IPR033762MCM_OB
IPR018525MCM_CS
IPR027417P-loop_NTPase
IPR012340NA-bd_OB-fold
Vocabulary: Biological Process
TermDefinition
GO:0006270DNA replication initiation
GO:0006260DNA replication
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005524ATP binding
GO:0003678DNA helicase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042555MCM complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006260 DNA replication
biological_process GO:0006270 DNA replication initiation
cellular_component GO:0042555 MCM complex
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003678 DNA helicase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 684..704
NoneNo IPR availableGENE3D3.30.1640.10coord: 167..279
e-value: 9.5E-28
score: 96.1
NoneNo IPR availableGENE3D3.40.50.300coord: 448..651
e-value: 2.1E-15
score: 56.3
NoneNo IPR availableGENE3D2.40.50.140coord: 280..436
e-value: 1.6E-46
score: 157.4
NoneNo IPR availableGENE3D1.10.8.300coord: 668..804
e-value: 1.2E-4
score: 21.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 674..698
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..153
NoneNo IPR availableCDDcd00009AAAcoord: 506..652
e-value: 2.04707E-5
score: 43.2887
IPR001208MCM domainPRINTSPR01657MCMFAMILYcoord: 641..649
score: 64.87
coord: 590..603
score: 78.49
coord: 614..626
score: 67.91
coord: 502..517
score: 76.14
coord: 562..576
score: 78.64
IPR001208MCM domainPFAMPF00493MCMcoord: 449..788
e-value: 2.5E-140
score: 467.2
IPR001208MCM domainPROSITEPS50051MCM_2coord: 461..667
score: 93.273
IPR008045DNA replication licensing factor Mcm2PRINTSPR01658MCMPROTEIN2coord: 349..363
score: 67.62
coord: 314..326
score: 64.29
coord: 291..308
score: 63.1
coord: 410..421
score: 82.14
coord: 425..436
score: 63.1
IPR008045DNA replication licensing factor Mcm2PFAMPF12619MCM2_Ncoord: 43..169
e-value: 3.1E-15
score: 56.7
IPR031327Mini-chromosome maintenance proteinSMARTSM00350mcmcoord: 278..789
e-value: 0.0
score: 1059.7
IPR027925MCM N-terminal domainPFAMPF14551MCM_Ncoord: 184..272
e-value: 1.7E-19
score: 70.3
IPR033762MCM OB domainPFAMPF17207MCM_OBcoord: 282..408
e-value: 2.1E-36
score: 124.4
IPR018525Mini-chromosome maintenance, conserved sitePROSITEPS00847MCM_1coord: 570..578
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 471..800
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 186..430

Blast
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BLAST of TCONS_00002801-protein vs. Swiss-Prot (Human)
Match: MCM2 (DNA replication licensing factor MCM2 OS=Homo sapiens GN=MCM2 PE=1 SV=4)

HSP 1 Score: 1276.54 bits (3302), Expect = 0.000e+0
Identity = 641/886 (72.35%), Postives = 743/886 (83.86%), Query Frame = 0 
Query:   12 GGESPRTGVVTSSPGRDDLAPFEDETDALLGNEAPDEEEGDGEELFGDDMENDYRPIPQLDTYDQS--ILDDEDQSELSVDGRVEAERAMRKRDREDGFAGGRMRRGLLYDESEEDEAAEPTASRRRRMAAERAAEREYADDDDEMIESIENLEDMKGHSVREWVSLAAPRLEIKNRFKQFLKTFCDERGENVYRTKIKQMCENNKQSLTVDYNTLANEHQVLAYFLPEAPAEMLKIFDEAAKEVVLSMFKNYERIAPDIHVRVSELPLMEDLRSLRQLHLNQLIRTGGVVTCSSGILPQLNMVKYDCVKCRFVLGPFFQGQNQELKPGSCPQCQSRGPFEINMEQTLYQNYQKIKIQESPSKVAAGRLPRSKDVVLLADLVDACKPGDEIEVTGIYRNNYDGSLNTANGFPVFATVIEANHVTKQDDKMAVTNLTDEDVREIIKLSKDEKIADRIMASIAPSIYGHDDIKRGIALALFGGVPKNPGGKHKLRGDINILLCGDPGTAKSQFLKYLEKTAIRPVFTTGQGASAVGLTAYVQRHPVTKEWTLEAGALVLADRGVCLIDEFDKMNDADRTSIHEAMEQQSISISKAGIVTSLQARCSIIAAANPIGGRYDASLTFAENVDLTEPILSRFDILCVVRDVVDPVQDEMLARFVVGSHVRHHPN-----GLEDEEEEDKEEENTAGESKVEQLSQEMLKKYIIYAKDKVTPNLLNMDQDKVSKMFASLRRESMITGSIPITVRHIESMIRMSEAHARMHLREYVHEDDVNMAIRVMLESFIDTQKFSVMRNMKKTFASYLSFKRDNNELLLFVLKQLVRDQVSYYKNRYRSEPDIIEIEEEDFMERARQINIHSLATFYESPLFTSNRFTHDKKRKCVIQNL 890
            G  S RT  +TSSPGRD L PFEDE++ LLG E P EEE DGEEL GD ME DYR IP+LD Y+     LDDED  EL+   R  AERAMR+RDRE G   GRMRRGLLYD  EEDE  E  A +RR++  ERA E    ++D+EMIESIENLED+KGHSVREWVS+A PRLEI +RFK FL+T  D  G NV++ +I  MC+ N++SL V+Y  LA    VLAYFLPEAPAE+L+IFDEAA EVVL+M+  Y+RI   IHVR+S LPL+E+LRSLRQLHLNQLIRT GVVT  +G+LPQL+MVKY+C KC FVLGPF Q QNQE+KPGSCP+CQS GPFE+NME+T+YQNYQ+I+IQESP KVAAGRLPRSKD +LLADLVD+CKPGDEIE+TGIY NNYDGSLNTANGFPVFATVI ANHV K+D+K+AV  LTDEDV+ I  LSKD++I ++I ASIAPSIYGH+DIKRG+ALALFGG PKNPGGKHK+RGDIN+LLCGDPGTAKSQFLKY+EK + R +FTTGQGASAVGLTAYVQRHPV++EWTLEAGALVLADRGVCLIDEFDKMND DRTSIHEAMEQQSISISKAGIVTSLQARC++IAAANPIGGRYD SLTF+ENVDLTEPI+SRFDILCVVRD VDPVQDEMLARFVVGSHVRHHP+     GL +    +    NT G   VE L QE+LKKYIIYAK++V P L  MDQDKV+KM++ LR+ESM TGSIPITVRHIESMIRM+EAHAR+HLR+YV EDDVNMAIRVMLESFIDTQKFSVMR+M+KTFA YLSF+RDNNELLLF+LKQLV +QV+Y +NR+ ++ D IE+ E+D +++ARQINIH+L+ FY+S LF  N+F+HD KRK ++Q  
Sbjct:   29 GRSSRRTDALTSSPGRD-LPPFEDESEGLLGTEGPLEEEEDGEELIGDGMERDYRAIPELDAYEAEGLALDDEDVEELTASQREAAERAMRQRDREAGRGLGRMRRGLLYDSDEEDE--ERPARKRRQV--ERATED--GEEDEEMIESIENLEDLKGHSVREWVSMAGPRLEIHHRFKNFLRTHVDSHGHNVFKERISDMCKENRESLVVNYEDLAAREHVLAYFLPEAPAELLQIFDEAALEVVLAMYPKYDRITNHIHVRISHLPLVEELRSLRQLHLNQLIRTSGVVTSCTGVLPQLSMVKYNCNKCNFVLGPFCQSQNQEVKPGSCPECQSAGPFEVNMEETIYQNYQRIRIQESPGKVAAGRLPRSKDAILLADLVDSCKPGDEIELTGIYHNNYDGSLNTANGFPVFATVILANHVAKKDNKVAVGELTDEDVKMITSLSKDQQIGEKIFASIAPSIYGHEDIKRGLALALFGGEPKNPGGKHKVRGDINVLLCGDPGTAKSQFLKYIEKVSSRAIFTTGQGASAVGLTAYVQRHPVSREWTLEAGALVLADRGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSLTFSENVDLTEPIISRFDILCVVRDTVDPVQDEMLARFVVGSHVRHHPSNKEEEGLANGSAAEPAMPNTYG---VEPLPQEVLKKYIIYAKERVHPKLNQMDQDKVAKMYSDLRKESMATGSIPITVRHIESMIRMAEAHARIHLRDYVIEDDVNMAIRVMLESFIDTQKFSVMRSMRKTFARYLSFRRDNNELLLFILKQLVAEQVTYQRNRFGAQQDTIEVPEKDLVDKARQINIHNLSAFYDSELFRMNKFSHDLKRKMILQQF 904
The following BLAST results are available for this feature:
BLAST of TCONS_00002801-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MCM20.000e+072.35DNA replication licensing factor MCM2 OS=Homo sapi... [more]
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