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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00002691-protein ID=TCONS_00002691-protein|Name=TCONS_00002691-protein|organism=Clytia hemisphaerica|type=polypeptide|length=571bp
MASSTQENVGGFVFIPGKEETLLGRLRVRYSTKSDCYFSGTCEDFTNRPK
RIGNSITELAYSYDNVERVTSEDNQVYIDRKSKEMNGRISWRFNFAPSGL
VLDKLTLKMSYQENHGGQVIVSVTGDSVGSKTALYCSSDVFMTITRLEGS
SALTITVNLNGENEREITRILSEDENTNYHMIEYPFDFQIRLKRPDFTIG
RSLIFIGLMYSHKEPLNTNNKERKRSRDRKKEIGNQGCNVKKKGYLNILI
HKAKRLPCRENGAYAEPKVKCTLFGKGCSQKVKTRAIGKTLNPTWNERLV
LSNVEQRQLPYSQLELQVVHAKSMFKIKSSETLGYIVLQRQNTVGTWRKP
VCRNHSVRRPEMQQQNTPNATVNKKIRTSSHFTSTENLLLGRNNIEKVVE
EENVYEIKNEEEDNKKLEIDEESKTNTWNENSESQENGTNFGSNDISNNH
SNSKLDIFDLPDLKESIVDDNNGNENHTEEVPPSYNHVCGKTNENHVCSK
TNENNVCGNVNENHICGNVNESFDSDMVNITFSDEDVKKLIQRTHSLKTT
SSNEDESFEILPNFPSSHENH Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006516 | glycoprotein catabolic process |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006516 |
glycoprotein catabolic process |
| cellular_component |
GO:0005737 |
cytoplasm |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 407..427 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 416..448 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 359..378 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 466..485 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 548..571 |
| IPR006588 | Peptide N glycanase, PAW domain | SMART | SM00613 | cppneu5 | coord: 20..117
e-value: 0.0037
score: 7.7 |
| IPR006588 | Peptide N glycanase, PAW domain | PFAM | PF04721 | PAW | coord: 9..165
e-value: 1.1E-18
score: 67.7 |
| IPR006588 | Peptide N glycanase, PAW domain | PROSITE | PS51398 | PAW | coord: 1..195
score: 9.297 |
| IPR000008 | C2 domain | SMART | SM00239 | C2_3c | coord: 245..352
e-value: 3.3E-7
score: 39.9 |
| IPR000008 | C2 domain | GENE3D | 2.60.40.150 | | coord: 214..416
e-value: 3.1E-15
score: 55.7 |
| IPR000008 | C2 domain | PFAM | PF00168 | C2 | coord: 244..340
e-value: 2.9E-11
score: 43.4 |
| IPR000008 | C2 domain | PROSITE | PS50004 | C2 | coord: 246..337
score: 11.492 |
| IPR000008 | C2 domain | SUPERFAMILY | 49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | coord: 238..342 |
| IPR008979 | Galactose-binding domain-like | SUPERFAMILY | 49785 | Galactose-binding domain-like | coord: 12..162 |
Blast
The following BLAST results are available for this feature:
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