TCONS_00002689-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00002689-protein
Unique Name	TCONS_00002689-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	535

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00002689-protein ID=TCONS_00002689-protein|Name=TCONS_00002689-protein|organism=Clytia hemisphaerica|type=polypeptide|length=535bp
MRGQVLLLFTLCCLSAVIQAKHLSQRGILKDLQKEVVELKEMVRDMESKR
DGIDEIAQDAKPKSKKPHVPDETDIDQKAGKFQEIHFIGDKSKRSMTEDE
INAELGYEGDEMILSEEQRKRGVGLNIRLWRNSQGIIHIPYEIDSSITNA
NNRAKIERHIREMNAAIKCNANAWKPRTNADQHFVRFRDGSGCSSYLGIA
KVFAEGGKTYQPITLASGCIAFNQGTVLHEMLHCMGFSHEQSRSDRDKYV
TINTENINPRAIRNFNKLSNMVQASLNTQYDYGSVMHYHSTAFSINRQPT
IVAKEPNVEFGQRNGMSPTDIKEMNDVYQCSNTPATTTTTTTTTRKPTTT
TTRKPATTTTRKPATTTTQGPVTQGPPASKEVFSCLQDCPSSVKMFPHRM
VKGEGVYSVTHKPEQQFKWGRLRVKMWADSMKSICSATQQGPVAVCMRIE
FNRDNQSAPKLIIKSQSFQNANNKRKFVAPKQLGEQEYSFETNLKCLTGK
QKNKINIFGFRNKKTVTEEGTLSIRNVEMISGSCN

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_001450	XLOC_001450	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00002689	TCONS_00002689	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001506	Peptidase_M12A
IPR006026	Peptidase_Metallo
IPR024079	MetalloPept_cat_dom
IPR034035	Astacin-like_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004222	metalloendopeptidase activity
GO:0008237	metallopeptidase activity
GO:0008270	zinc ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0008270	zinc ion binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 29..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 331..378
None	No IPR available	SUPERFAMILY	55486	Metalloproteases ("zincins"), catalytic domain	coord: 126..330
IPR001506	Peptidase M12A	PRINTS	PR00480	ASTACIN	coord: 240..257 score: 55.46 coord: 279..294 score: 56.25 coord: 221..239 score: 39.82 coord: 316..329 score: 32.86
IPR001506	Peptidase M12A	PFAM	PF01400	Astacin	coord: 138..331 e-value: 6.1E-47 score: 159.6
IPR006026	Peptidase, metallopeptidase	SMART	SM00235	col_5	coord: 126..284 e-value: 5.5E-26 score: 102.3
IPR024079	Metallopeptidase, catalytic domain	GENE3D	3.40.390.10		coord: 125..332 e-value: 2.0E-47 score: 161.2
IPR034035	Astacin-like metallopeptidase domain	CDD	cd04280	ZnMc_astacin_like	coord: 139..328 e-value: 3.11006E-67 score: 216.283

Blast

[Close]

BLAST of TCONS_00002689-protein vs. Swiss-Prot (Human)
Match: MEP1B (Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=1 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 1.080e-27
Identity = 84/239 (35.15%), Postives = 118/239 (49.37%), Query Frame = 0

Query:  100 EINAELG---YEGDEMILSEEQRKRGVGLNIRLWRNSQGIIHIPYEIDSSITNANNRAKIERHIREMNAAIKCNANAWKPRTNADQHFVRFRDGSGCSSYLGIAKVFAEGGKTYQPITLASGCIAFNQGTVLHEMLHCMGFSHEQSRSDRDKYVTINTENINPRAIRNFNKLSNMVQASLNTQYDYGSVMHYHSTAFSINRQPTIVAKEPNVE--FGQRNGMSPTDIKEMNDVYQCSNT 333
            +IN  LG   +EGD  +   + R   +G   R W ++     IPY ++ S+   N +  I             +   W   TN    ++    GSGC S +G  +V    GK  Q +++ + C      TV HE LH +GF HEQSRSDRD YV I  + I      NFN  S+ +  SLN  YDY SVMHY  TAF    +PTIV +  + E   GQR   S +D+ ++N +Y CS++
Sbjct:   39 DINEGLGLDLFEGDIRLDRAQIRNSIIGEKYR-WPHT-----IPYVLEDSL-EMNAKGVILNAFERYRLKTCIDFKPWAGETN----YISVFKGSGCWSSVGNRRV----GK--QELSIGANCDRI--ATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYDYTSVMHYSKTAFQNGTEPTIVTRISDFEDVIGQRMDFSDSDLLKLNQLYNCSSS 258

The following BLAST results are available for this feature:

BLAST of TCONS_00002689-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00002689-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MEP1B	1.080e-27	35.15	Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=...	[more]

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TCONS_00002689-protein (polypeptide) - C. hemisphaerica