TCONS_00002544-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002544-protein
Unique NameTCONS_00002544-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length474

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002544-protein ID=TCONS_00002544-protein|Name=TCONS_00002544-protein|organism=Clytia hemisphaerica|type=polypeptide|length=474bp
MVQTGIDFSYKKWLKNRQLTTKIFYYIAIILGIEYSVTFGTLFVYLKNFL
QVKNHLDVFYSCISGIYIVSMIMSAVFVGKIFDRTRRTRLIFSSAIASLV
LGNVLYTIPISPYVLLFGRLLSGVGGCLRPIIMSEITRSFAPDEVVSQIS
AVSCTFVLGFTLGPCINFAFVEADFWFLGVHIKYANGASLVTCFLYTVAF
FLSLFFVSDLSREFDLKEALKSLSDEDLKEASLDSEQKLITNEPFEQTQE
ESVPMIEKSTANANNEIETIFVLRKFFTNVDTILILAMSFTMMFCVVLYD
LWVPLACIELLNWTNLDINLIYLTNGIVNLLFLLVCIFKPPKIETMIYLA
YAAFASIIFIFGAFLFFKYDTWHLTWLDSILWFIGAFCVCIIFTAEELLL
ISTLAKMVPSQAQSVSQGIRQASARLGAAIGLFSAAFTFQHLNYFCPFVF
FVSILLFLLLVIRKRHFCEPVPIF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001363XLOC_001363Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002544TCONS_00002544Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 60..393
e-value: 1.0E-18
score: 67.3
NoneNo IPR availableGENE3D1.20.1250.20coord: 269..465
e-value: 9.1E-11
score: 40.9
NoneNo IPR availableGENE3D1.20.1250.20coord: 2..252
e-value: 7.1E-18
score: 64.1
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 20..465
score: 9.591
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 39..462
e-value: 1.65105E-7
score: 50.3901
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 263..462
coord: 17..227

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002544-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top