TCONS_00002500-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002500-protein
Unique NameTCONS_00002500-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length494

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002500-protein ID=TCONS_00002500-protein|Name=TCONS_00002500-protein|organism=Clytia hemisphaerica|type=polypeptide|length=494bp
MKFYIIVLICFMCTKLTECLQWDNSVSDLAINANSSGSAIIKFRFSYGTE
DRSSVNIECGIWNTDQAKIIPMVTKMGNQPAQRRSGVTGDVLGNNAALYT
ESTQPTVIGLRLSNIAKTFPTQYRCDASFTKADGVADSEASDRVNLIVLD
RPKFVDCLKNIESTSTTAGNSLDITCKVSGNPTPNLKCSLLAFDRDILNT
FPKKSNGRNLDEDEPGTPFNISSSFSNLPKEARIVRCFASQTLTGTNSLE
RKITVLHTPFPPKNFSQENSPDRTSITVSWLPLTNDEWGGAKDGYRVAYY
MVGQDPRLNLTTKELGHQPSEFGQDANVYVSRKVGEKDVEFYFYTIKGLN
PQRPYQVYLYAQNRYGKGDDSIRFSMTPGDNPNAMESRNPESDSKLAEII
GGVIGGTIVLVLIVILVVWLCRRPSAPKKSKYPTSYVEDAVDYPPQQPQQ
NLYAGVNNSKQRNGSSNHSDIMSNGDGYPMRGMNSYETSEKAYV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001339XLOC_001339Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002500TCONS_00002500Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR013783Ig-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 259..368
e-value: 3.2E-7
score: 40.0
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 261..370
e-value: 7.6E-9
score: 35.7
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 261..381
score: 11.393
IPR003961Fibronectin type IIICDDcd00063FN3coord: 259..377
e-value: 1.2276E-7
score: 48.2615
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 252..374
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 267..389
e-value: 2.2E-11
score: 43.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 31..170
e-value: 1.3E-4
score: 21.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 171..266
e-value: 0.0012
score: 18.3
NoneNo IPR availableGENE3D1.20.5.510coord: 390..423
e-value: 1.8E-8
score: 33.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 440..494

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002500-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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