TCONS_00002486-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002486-protein
Unique NameTCONS_00002486-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length481

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002486-protein ID=TCONS_00002486-protein|Name=TCONS_00002486-protein|organism=Clytia hemisphaerica|type=polypeptide|length=481bp
MKNPSTLYLHLIWFIITCANGSTFNTTYKTTLFAMKQRPYNNLVIELLER
STMLLCDHIIPYPDTSRIHYTESHKKLVDLLTQKNSTRILEMLNLNKAQT
NINHNLLMVGPTTFNDLKDINKEFYDIIVLVKSKPVLILQKSKVLLLTKF
LQAFQNCFTAIVFALLCATIVCTAIWVIEIHSVSKHFPDSPAVGILSSFW
FTVVTMTTVGYGDKTPKHPLSRFITIVWIMFGLMLVALITASAWNSIDED
YDTEGITIGVIDRSVEVLMANKTLMGRPRAYDEYVDVMRAVKQGKVDAAL
MERYVAAAFFATGEYDDLLIEREFDRDITLRMFAHYKKSVVGCKENGLSM
NSEEMEDEKEIITDFIGDPYKTEKYFLQPLSQIFAGQDNGLMIFMGYTGL
VIVVLALVGEIIYRVKFYSSKDTQHGRNKHSLQEEAEYEMRFEEFRKQVE
RFVEVEVRYRMRRESQQTTIANNNVAHLSVD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001328XLOC_001328Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002486TCONS_00002486Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013099K_chnl_dom
IPR001320Iontro_rcpt
Vocabulary: Molecular Function
TermDefinition
GO:0004970ionotropic glutamate receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0004970 ionotropic glutamate receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 178..241
e-value: 2.0E-13
score: 50.0
IPR001320Ionotropic glutamate receptorPFAMPF00060Lig_chancoord: 165..242
e-value: 4.3E-7
score: 29.8
NoneNo IPR availableGENE3D3.40.190.10coord: 248..325
e-value: 5.2E-6
score: 26.1
NoneNo IPR availableGENE3D1.10.287.70coord: 140..247
e-value: 2.7E-19
score: 68.3
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 154..244
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 228..321

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002486-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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