TCONS_00002425-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002425-protein
Unique NameTCONS_00002425-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length493

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002425-protein ID=TCONS_00002425-protein|Name=TCONS_00002425-protein|organism=Clytia hemisphaerica|type=polypeptide|length=493bp
MGLNEKILIFTSLLNYLSSEKVYIFDVFKRKGLTEDWNKDNSQCDGVSSW
YFDENDQASPRFQVCFTRNCFLESPSYPITSINTVYADAKFTGRYCNALP
KPNPDCGENITVNAIMLDTFPNTKTHNTPTEKEINFPVMDDLKVPIPQKN
GRPPSFFDAKETITYDNKLNKTFIRLLFDSKMGCGGVSDLEVYYYKCPST
TSSLAVFGDINAPTYSENVKEYQGKCVDNAFQVVDEPLTMKCLWNGTIAS
TTGQCICLQGYEKEGNECKKIPDISSAIVFLNITSSSVEITWSHLSQVNK
TNIYIVDCNDCPSGVLPKSTTNKFITINGLGSFADYEISVTFSSEVSRMI
GENQTSEFQSFQTLPGVPGKVRNLMQKSLDNGKVELSWDPPFAKGNNIIT
YLLTYGGSTKKTTLTTHILDPDVEEQTFSVEIAAQVSVGGQLLTGESSTF
KEKIHVKGGAALDMAIGVGVGVVLLVIIIGIVAFYIYRKKNLK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001305XLOC_001305Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002425TCONS_00002425Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR013783Ig-like_fold
IPR001090Ephrin_rcpt_lig-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 368..441
e-value: 0.71
score: 18.9
coord: 272..349
e-value: 10.0
score: 11.4
IPR003961Fibronectin type IIICDDcd00063FN3coord: 272..363
e-value: 0.0011329
score: 36.3203
IPR003961Fibronectin type IIICDDcd00063FN3coord: 368..431
e-value: 0.00334931
score: 34.7795
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 272..435
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 363..448
e-value: 8.1E-9
score: 35.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 265..362
e-value: 1.2E-7
score: 31.3
NoneNo IPR availableGENE3D1.20.5.510coord: 449..490
e-value: 2.9E-4
score: 20.1
NoneNo IPR availableGENE3D2.60.40.1770coord: 198..255
e-value: 1.4E-9
score: 37.5
NoneNo IPR availableGENE3D3.30.200.20coord: 47..197
e-value: 5.6E-7
score: 29.4
IPR001090Ephrin receptor ligand binding domainPFAMPF01404Ephrin_lbdcoord: 49..197
e-value: 2.6E-5
score: 24.2
IPR001090Ephrin receptor ligand binding domainPROSITEPS51550EPH_LBDcoord: 1..202
score: 13.481

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002425-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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