TCONS_00002371-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002371-protein
Unique NameTCONS_00002371-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length190

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002371-protein ID=TCONS_00002371-protein|Name=TCONS_00002371-protein|organism=Clytia hemisphaerica|type=polypeptide|length=190bp
MAVSGKINSWETIYQKHKEKQLINPFSKWEGASHREALSKSHEEYGNPIY
GTDTEVRGRAAGHLMMHEMKLLVFMIKEHGKKIGNNSIGITFGELFRLYT
QVSNKLVGALLRARKYGLLDFKGEMLFQRRDEDTMISLNLAKVSEENCFK
TRPKPVDYDMLLTDLKWEIKYGDEKAERKDRLSRGRAGRN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001258XLOC_001258Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002371TCONS_00002371Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027817Costars_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027817Costars domainSMARTSM01283Costars_2coord: 63..139
e-value: 6.0E-28
score: 108.8
IPR027817Costars domainPFAMPF14705Costarscoord: 66..138
e-value: 4.1E-25
score: 87.6

Blast
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BLAST of TCONS_00002371-protein vs. Swiss-Prot (Human)
Match: ABRA (Actin-binding Rho-activating protein OS=Homo sapiens GN=ABRA PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.637e-23
Identity = 53/133 (39.85%), Postives = 79/133 (59.40%), Query Frame = 0 
Query:   10 WETIYQKHKEKQLINPFSKWEGASHREALS----KSHEEYGNPIYGTDTEVRGRAAGHLMMHEMKLLVFMIKEHGKKIGNNSIGITFGELFRLYTQVSNKLVGALLRARKYGLLDFKGEMLFQRRDEDTMISL 138
            W+    +H + Q +NPFS  E   +  A+S    K  E YG P  GT T  R + A   +  EM  + F+I    +   +  I +TFG+LF  Y ++S+K+VG L+RARK+GL+DF+GEML+Q RD+  +I+L
Sbjct:  249 WQQWADEHIQSQKLNPFS--EEFDYELAMSTRLHKGDEGYGRPKEGTKTAERAKRAEEHIYREMMDMCFIICTMARHRRDGKIQVTFGDLFDRYVRISDKVVGILMRARKHGLVDFEGEMLWQGRDDHVVITL 379
The following BLAST results are available for this feature:
BLAST of TCONS_00002371-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABRA3.637e-2339.85Actin-binding Rho-activating protein OS=Homo sapie... [more]
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