TCONS_00002339-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002339-protein
Unique NameTCONS_00002339-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length241

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002339-protein ID=TCONS_00002339-protein|Name=TCONS_00002339-protein|organism=Clytia hemisphaerica|type=polypeptide|length=241bp
MNCIGMTLKTLVTLILVNVSFSFSLLSMTARNMFLSNSNDKMDIKLLPAL
LKYLPKPTLGEEDYKILTFQLGNSFKPEYMSIGDPRQAMDDVGRNNEADD
AQEDDMQTHPQMSNELKEMTLKKVYSKMPKSHRKRATLGKRTSHRMKNWL
WNLSKCPVYYTWMDLGKNIFPRYIKRGECSKKKTCSYPAGMKCQPKSWRD
VNVLIYVCLKEINSVKLGCKWRQMTLNVLTECQCGCSKKQR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001235XLOC_001235Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002339TCONS_00002339Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029034Cystine-knot_cytokine
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF05806Noggincoord: 64..236
e-value: 2.8E-39
score: 135.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..109
IPR029034Cystine-knot cytokineGENE3D2.10.90.10coord: 40..236
e-value: 8.4E-39
score: 133.2
IPR029034Cystine-knot cytokineSUPERFAMILY57501Cystine-knot cytokinescoord: 38..236

Blast
[Close]
BLAST of TCONS_00002339-protein vs. Swiss-Prot (Human)
Match: NOGG (Noggin OS=Homo sapiens GN=NOG PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.168e-21
Identity = 50/176 (28.41%), Postives = 83/176 (47.16%), Query Frame = 0 
Query:   66 ILTFQLGNSFKPEYMSIGDP--RQAMDDVGRNNEADDAQEDDM---QTHPQMSNELKEMTLKKVYSKMPKSHRKRATLGKRTSHRMKNWLWNLSKCPVYYTWMDLGKNIFPRYIKRGECSKKKTCSYPAGMKCQPKSWRDVNVLIYVCLKEINSVKLGCKWRQMTLNVLTECQCGC 236
            +L   LG  + P +M+   P  R            D A+ D +   +    M +E+K +   +  ++      K+  L K+   +++ WLW+ + CPV Y W DLG   +PRY+K G C  K++CS P GM C+P     + VL + C +        C W  +   +++EC+C C
Sbjct:   65 LLRSLLGGHYDPGFMATSPPEDRPGGGGGAAGGAEDLAELDQLLRQRPSGAMPSEIKGLEFSEGLAQG-----KKQRLSKKLRRKLQMWLWSQTFCPVLYAWNDLGSRFWPRYVKVGSCFSKRSCSVPEGMVCKPSKSVHLTVLRWRCQRRGGQR---CGWIPIQYPIISECKCSC 232
The following BLAST results are available for this feature:
BLAST of TCONS_00002339-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NOGG2.168e-2128.41Noggin OS=Homo sapiens GN=NOG PE=1 SV=1[more]
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