TCONS_00002270-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002270-protein
Unique NameTCONS_00002270-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length515

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002270-protein ID=TCONS_00002270-protein|Name=TCONS_00002270-protein|organism=Clytia hemisphaerica|type=polypeptide|length=515bp
AKQEGFRSRSNHIKQLWKTHHKETAMDAEHKINLQLGLFSFLMILGILGN
VLVIYVYSRAKNRKRFLKFERMILILAVVDLLASTINPAFYIYQIKTNYK
SWHFGYAGCKVIPALGPIFSAISLGLILLMAIDRDRAVCTPFKKQFSLST
LYKAIAVTIFLSIGINVPYMYFLDVHEGGKRCLIGRKGALLYIKSLVSIN
IISDTCFFLIFSVTTVRVCLKLAYKTQLTYPRSREFRARETRRILKMIVS
MGVCFIALIFPRDIFITTTYMSYLHPPPIKVKNYFMVNAILKVIHTSNSV
VNVFLYSVFNRRFRRDALHLFMQFKYIRQLSGYTSEDSSYYSDDGASSRR
FSSRKQSDMNQSKRLQVLRSISVFKTEVSSINSSIQPSLQTSPDMTKRSN
GTHTPQYVANAPGTPYIGVSHLEDGEKEKVVRIATPPTVAEKRPKHETTI
TQTIDHLNIMEDPTPKCSISPRDLNNPIFGDVEIDHIKEDDENDDDRFDE
MIMSASLINEQSPML
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001202XLOC_001202Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002270TCONS_00002270Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 69..90
score: 28.11
coord: 34..58
score: 28.96
coord: 116..138
score: 22.88
coord: 288..314
score: 24.34
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 49..306
e-value: 6.5E-21
score: 74.7
NoneNo IPR availableGENE3D1.20.1070.10coord: 5..366
e-value: 5.3E-42
score: 143.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 335..360
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..406
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 34..335
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 49..306
score: 21.796

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002270-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top