TCONS_00002172-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002172-protein
Unique NameTCONS_00002172-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1223

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002172-protein ID=TCONS_00002172-protein|Name=TCONS_00002172-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1223bp
MVKRNLSERSDGSTKLSKKDSIRSTGSSTKGPRRKESFKSSKKDGFRSPE
KEKRTSKKKSTVSFNVSPRVEKIPNPKKRSVANLNQQENNEETPELSHND
SRTSYIPFEEENSLPELSQAVIQKKMGKMIHLLDTRPMNYVCVTDRRNRN
CLHYAAYLGYTEILETLLNRTDAHKIINAKDDSGKTPLFKAAETSSLACV
EILLNHGSDVTIQDNDGISVMHVATLADNAMVMKTLWKHKADLNTKDKLG
FTPLHLAAGLGLRGPTHFLLRHGAVVDPIDGKGRTPLLAAAADKNVEIIE
ILLQHGANATIQDDRGRTAKNIFSTLTLDRRFSDIQPTRTTSSHHFPFEM
ITGRTNSFINDIKKVHDQGAVDDASRRGSTTITPRGSAANTPKFDEMMKG
PQFSFDEKDIEQHQEQSKPIEKVKDESSYKNLISPINWKNILESPRRLKK
SFSRSDSNKYTQKSPTKAGSTKRSSLKRSKAVVDEDLIIPQLEFDLAQMD
AEDNLSDRSRTSSRQGSFRSRTDSINSVRQQAKSYQAAPSPRMGSAMSQR
SFSDPNLDRIAEEEYHESNRPSSRLSQRSQPDDIEREFLTNQQLQNSYTE
PSYNNPPLQPSGDLNQDVHLNQQLQQISLSASQLSQQLQMSIQSRLSGSS
VQPQTQPQILTPQPTLVTHQPTVATPQPVLVTPQPTLMTPQPTFVTPQPS
VVIPQPLVTHQAVQVTPRHIHISQPSIPQPSIPQPYQYNLNLSSSSQFPS
RQQPSYSRQNSQQADYSHSQNSKHRNSTFKRNVSIEEPISRTSDQGRTHT
MDQTSTKSNVTPAFEEDRYLYMCLKNRELLLKKIKQCEDLESEIKNGQTD
EHNNASSEHLKETSLIDENSALRDELRELKKENLTLNEHILFNKRKKPSR
SRGNSRSRSRSQSRSRSRSRSKSRERLDQSRKNLPDPNRSQQTPDSEYED
LERENSTSDGEVKPPERSRRRGQDSRNTEYSDEGFSPHESEDESEYSYSE
GDSYFQETINKLLKENILLKRSHKAYERCHKELEDEVVEHKTTIKNLEEK
LQEEEKKREKAENDYEELQKAHIALEQAHIELDYGMKKMLEDNVDMRKDL
TFLQIKKEKDSTDKGEVEQEPQSSFRKAFNRFSPQDGGKQTPPKRPDPPT
RPTSGVSNSTNLSKDSTTKPKIPERPKPFADTRQKAIPPPPSTSKPSSRP
RSVELDLKPIKKKKKRRKMFILF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001131XLOC_001131Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002172TCONS_00002172Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1030..1078
NoneNo IPR availableCOILSCoilCoilcoord: 862..889
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 845..866
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 503..553
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 723..809
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1108..1223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 369..400
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 889..1000
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 595..615
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 449..480
NoneNo IPR availableCDDcd00204ANKcoord: 178..303
e-value: 6.00226E-33
score: 124.418
NoneNo IPR availableCDDcd00204ANKcoord: 117..204
e-value: 6.55105E-12
score: 63.1714
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 282..311
e-value: 3.6E-4
score: 29.9
coord: 147..179
e-value: 1.3
score: 18.0
coord: 249..278
e-value: 92.0
score: 11.9
coord: 216..245
e-value: 110.0
score: 11.6
coord: 183..212
e-value: 0.0013
score: 28.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 249..281
score: 9.965
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 216..248
score: 9.618
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 282..314
score: 13.33
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 183..215
score: 12.102
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 253..323
e-value: 1.1E-18
score: 66.8
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 221..313
e-value: 4.1E-10
score: 40.0
coord: 118..214
e-value: 3.1E-12
score: 46.8
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 13..252
e-value: 9.3E-34
score: 116.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 147..319
score: 45.519
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 116..321

Blast
[Close]
BLAST of TCONS_00002172-protein vs. Swiss-Prot (Human)
Match: POTB2 (POTE ankyrin domain family member B2 OS=Homo sapiens GN=POTEB2 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.163e-23
Identity = 62/208 (29.81%), Postives = 106/208 (50.96%), Query Frame = 0 
Query:  145 DRRNRNCLHYAAYLGYTEILETLLNRTDAHKIINAKDDSGKTPLFKAAETSSLACVEILLNHGSDVTIQDNDGISVMHVATLADNAMVMKTLWKHKADLNTKDKLGFTPLHLAAGLGLRGPTHFLLRHGAVVDPIDGKGRTPLLAAAADKNVEIIEILLQHGANATIQDDRGRTAKNIFSTLTLDRRFSDIQPTRTTSSHHFPFEMIT 352
            D++ R  LH A+  G +E+++ LL+R      +N  D+  +T L KA +     CV +LL HG+D  IQD  G + +H A   ++ ++ K L  + AD+ +K+K G TPL L      +    FL++  A ++ +D  GRT L+ A    +  I+ +LL+   + + QD  G+TA          R ++       +S HH   E+++
Sbjct:  133 DKQKRTALHLASANGNSEVVQLLLDRRCQ---LNVLDNKKRTALIKAVQCQEDECVLMLLEHGADGNIQDEYGNTALHYAIYNEDKLMAKALLLYGADIESKNKCGLTPLLLGVHEQKQEVVKFLIKKKANLNALDRYGRTALILAVCCGSASIVNLLLEQNVDVSSQDLSGQTA----------REYA------VSSHHHVICELLS 321
The following BLAST results are available for this feature:
BLAST of TCONS_00002172-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
POTB22.163e-2329.81POTE ankyrin domain family member B2 OS=Homo sapie... [more]
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