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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00002041-protein ID=TCONS_00002041-protein|Name=TCONS_00002041-protein|organism=Clytia hemisphaerica|type=polypeptide|length=653bp
MAFVEGYDVETVQDISSDLFCVICLKLMRNPVQFKCGHGMCFNCYKQMVS
KVKNKGVKELQCPQCREIVRDNQIFSNVMLHRLILSIQVYCSNEDTGCQW
VGEVNQLEEHLLSCAKGTGYHPNRRALTFGKKQHGFNNSASSSSNNHHSF
NQSQHDNFQNNVMLNMLDSLTSLRSKMDFIENNITPNHTSSPERHATSAC
HSRTPSSGTGGNTPKVQRKRSRRSQSEETTALTKFKNLIHFENQTYLKIG
FFVALISIYLMTAKLFYTMENTPSYDSTACGNRFDRLLSQDIQKSTETFE
AGFHRLSEFHEYNIRIHLHELQSQEKEAAEMIPSFYREMNRTIVEMDRRF
HWLIEQSRDEIKRNITSFDDRSLREFSIDSVVVLVGMVNDITNNVWRRVT
EEMSFSEYRMLNRAGALVDFVRQKYFEILEKAKFNLSQTKGRSALKDLSL
EYEGFVSNVTQRLTSLHEDQVESMVRLDISTVRKFYEDYLRAYYTNQSQL
VTHENRLQFLVDSVQNKNLMNGRFIWQLNATRILETRRSKDVQSSIEFRS
GSMGKARLYLYRDRVRKGFWKMSFVQVDLNPVKIWLSVLSQVKPELLLIH
ENIVGSVTIPVTKAERSKVKVVKHFSLPMNTTKLIEKGYIKNGRIYIRCL
TTD Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001841 | Zinc finger, RING-type | SMART | SM00184 | ring_2 | coord: 21..65
e-value: 9.0E-7
score: 38.5 |
| IPR001841 | Zinc finger, RING-type | PROSITE | PS50089 | ZF_RING_2 | coord: 21..66
score: 11.575 |
| IPR001841 | Zinc finger, RING-type | CDD | cd00162 | RING | coord: 21..69
e-value: 1.58079E-8
score: 50.522 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 4..82
e-value: 1.4E-14
score: 52.8 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 83..128
e-value: 1.1E-7
score: 31.4 |
| None | No IPR available | PFAM | PF13920 | zf-C3HC4_3 | coord: 18..70
e-value: 1.5E-7
score: 31.1 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 133..154 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 183..228 |
| None | No IPR available | SUPERFAMILY | 57850 | RING/U-box | coord: 12..91 |
| IPR017907 | Zinc finger, RING-type, conserved site | PROSITE | PS00518 | ZF_RING_1 | coord: 36..45 |
Blast
The following BLAST results are available for this feature:
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