TCONS_00002040-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002040-protein
Unique NameTCONS_00002040-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length630

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002040-protein ID=TCONS_00002040-protein|Name=TCONS_00002040-protein|organism=Clytia hemisphaerica|type=polypeptide|length=630bp
MAFVEGYDVETVQDISSDLFCVICLKLMRNPVQFKCGHGMCFVCFKSLLH
RSKQKATTQCPQCREVVKEGQIVSNVMLHRIILSLHVLCGNHDNGCKWTG
ELDRFDEHFAQCTKHSENAANKKSKKKKKRADQNQQAPQNIQNELLLQIT
EQLSNLKEYIISPNATKTQDSDPNSTDAAMKPPFWTRFNNKSVTSSRKTK
TLALILFTISLLSGMHILGGGFSDWFMDEDATANQTPGIDHVATYQQVHS
ELAKMNSLIYAQQNNFFQLHLGSKELQSDLEAQKTATLRLTGLYLKNSLN
AAHFTKTSIADDVDDVFSQEMMHRKLGLERTAGFQLVNMKEDAYARLKSL
QNQSLATLTVFNATDFLTPFLKDCKAFQRDFAQQIIIALTTSENLVTHSF
QQARRKMAFYVAKESDFTGFDYEDVKKHLVEEREKSDVILREKLNEAKQE
EYVRMLRQEYNALNQTYHEMLLKSISQYELDASYQNRAAFVFSQLENVDF
GNGRYLWRMNSSLLPLLPTGHGYYSEKFTTIEAKAPNQVVTYAKLWLLRT
SVQDNTWKVTYEQYGDSPVRMKVLVVNQKMDKDLECVESFRQTNEKDELI
IDFDIPFSFEVLEENGYIVDEKILVKAYVV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001073XLOC_001073Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002040TCONS_00002040Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 21..63
e-value: 2.5E-6
score: 37.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 21..64
score: 11.84
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 21..67
e-value: 2.57068E-9
score: 52.8332
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 18..68
e-value: 2.0E-8
score: 33.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..139
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 12..89
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 82..135
e-value: 6.2E-7
score: 29.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 4..81
e-value: 8.0E-15
score: 53.6

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002040-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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