TCONS_00001945-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001945-protein
Unique NameTCONS_00001945-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2400

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001945-protein ID=TCONS_00001945-protein|Name=TCONS_00001945-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2400bp
MKEKQDVLKLHLLKEKGKGLGIQLTKNTDTKKKGIFISHLLEDSVAEHDG
RLQIGDEILFINGQSLLTLGHKEAVQLLHSASNPVQLVISRKLVSEKRQS
SRKPSKSDVSPELFENNNNIFIGDVESPRLYTPTSEHHTKEIILINGRDG
KKLGFSMAGGAEYGSPLVVKNILAGGIASLDGRLRIGDHLLKVNDIPLDN
FKYNEAVSLFKSLKQGQIKLLVKTIRTRRSSNSSNDSTPRDLIDGANIDV
VIKKVPGKGLGVGFGQSSRSGIFIKYLAKGSLAARKSLLQLKDQVVALNG
IGTRDTSLDDFHKIIHNIQPGDVRLSVIRHHRDSSGRGSMTPETSRSRSE
TGSSVSSGVSTVGSGNDLAGLMSPAVPLNKQKQVYKRERLRSAILLNESD
DDDDYEDEAMIALYQKRLKAKAEKAESAKTKDGWLMKHDVINSDEDGGYH
GNEEDAVMNIEMKQHSPNQKTMGNKKPSKEEGVYPGVDADGLLKVIIERD
KTGSLGLSIKMKKNNKTQGAHEGVYAKNVAVGGSADRGGVKSGDQIIQVN
KTKMEDLTYGGVIAFFKKIPKKTTFVLRRPSSEDTRLSTPSSTPQKKTNS
TSSLSVPNLIDDDDMNAQSQNTPILRNSILESSFRHSRTPSFRRTNSQQQ
GGVTRASTFKIIGKIGGIGVPLPESSDVPEGYNVHLLEVSLTKGENLGLS
LVPATSKLKSYLQIRQIQLTSPCVDLLLRNDAIFSVNGISFKHINHAQAL
QILKQCEHLVKLVILREKDTTAETKNDHVTPPRHIEKKVRLKSPKTNDAL
PGTIVNELKSHLIRPTLHRRTTENSSLVSIPQLTGNGHKSSPVLNQRKAS
VKKNLAVPNRSDEDSSSLSSNPNTPSSLPKCYAVNERTNVGAFMVKKEKT
YKVLGLDVMMDELGLCHVTEISKHGMFANDNRIRVGDNLLAINKESLSGK
PISFVRNAIRSVSRGDVEIILRAAPDEDEESGDSSSTNRNADELESVITT
ATTARFDDFHDPTELPLPADTRSKVPTQRQTSFNASKNGIPAPSTFQSDQ
ESSSDDDAYSDVTCLPPAPPKPIAPHLIGDDNDSDNESCFSAMPAPPPPV
TNFKPKNGSPSSRRSTRKRIQPDFDDAKSFRSDFDDGKSDFYIPPPPPPV
LKSALGEGYASDNSDEDSQSDKEREKLGHKKSPVVEEENLAYKRRLSIEI
AQKFVNQNIEGDENLAISRNDEEPTEIYYPRSYHQQKDKKKSLFSRLKSK
LLLPSKNDLNSPDLNNTKMRKKDKQQRQRPVSAADFRDTSSRRQLKASIS
QPDLMVAVQNADVTDSGNGMRKFDSLDGQSFSNEVNTMSSKASLSTPDLS
MKQSSSSSSLSVKQLPRILSFRKQKPENGQKKKKRRNSRPNVSPPRSPAP
VPPSPTLDAKDSPTINIEPNFEPFSPYDIIPSPSSDHCDGKPVESPYEVI
DKFRFSGNQSNTLSETSSASQSRYAADGPSTLKEECSFENALQDSRLGNH
LGHLDEKPPPPPPRPPSLQSSPLLRRNLEIGIIETDTDERPGLKKRGSSL
LSLNFPPPPGINYDDEKSSPIATSSVENSLDFSDEGLRTPEMSQERKRTL
SLRDKADPKLQPFQVPNSYQGHLSPGNGVRGRPVSPRDIHGNYSNEDDDI
SDWGSEFSNSVVNFETNNKGTSRYASEHRANLFEVSTKVRSHSKEPPTNV
TNPKTKNLDRKKLFSINSNKQRSTSSNGTDVEMRPPTTNKEKRDPYPMAT
SEQKITEGEIPRSKSNPIPKPPRRGATHHIPNEKKPDPSYENIQTYQHQD
QPKVERSSSIIGRPVPPIPIEDTEEFRMNNTSLTDDELNQLYASVDLVKK
KADRLKSSGSSNSEESGGRFTVHTTLDENGQVKEGVFKVKLVRESGKTLG
FVITGGRDTPIEKVLIKQVEDQSLASTCSIPLKAGDELLEVNGQDVTEFT
HFEVLNTLQDSPPLVKLTIFRSSNGNQSLLQQQSTDTHIVKDIASKLDSQ
SILASFKGTGQHSKESEIISINKRRLSNSTKPQLTVDSFDSLMDGEDKIN
RITKTPPLLPKSLQNTPNKKNAKNTPTRPRGRTSSVSSTNINVSVTSPMK
ATTPLKMTTPPKTNDGLEWLEIDLYKQPGRGLGIAVTGGPKHIVKDGIRV
KRLIPDSIASLDNRLRKDDLICTINGRQLKGMTQGDALNFLKDIPKVINL
GVKRGSVPSNDVLLSPASVRPKSAPHSDKGDTVRRSRPQTKEPPQRRSRS
ETRNVETPKETPKKRPSSVSRLSRLFRGSSESINSLGKEDKQEKQSSKSR
KRSSSKRKNEPALLTIIFDKTDKNAFDFTLAGGANTIYGDQPVLVESVRR
GSELSKSLRINDELISIQGIDVRRFPVNKTVELLSRLPLGRVCVVVQRKP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001006XLOC_001006Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001945TCONS_00001945Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 411..431
NoneNo IPR availableGENE3D2.30.42.10coord: 883..997
e-value: 6.3E-6
score: 25.6
NoneNo IPR availableGENE3D2.30.42.10coord: 131..237
e-value: 1.3E-16
score: 59.9
NoneNo IPR availableGENE3D2.30.42.10coord: 2284..2400
e-value: 1.5E-11
score: 43.8
NoneNo IPR availableGENE3D2.30.42.10coord: 681..779
e-value: 8.8E-10
score: 37.9
NoneNo IPR availableGENE3D2.30.42.10coord: 1..103
e-value: 5.0E-21
score: 74.3
NoneNo IPR availableGENE3D2.30.42.10coord: 1885..1996
e-value: 1.0E-18
score: 67.0
coord: 491..606
e-value: 2.3E-15
score: 56.2
NoneNo IPR availableGENE3D2.30.42.10coord: 244..333
e-value: 6.7E-12
score: 44.9
NoneNo IPR availableGENE3D2.30.42.10coord: 2112..2212
e-value: 6.2E-15
score: 54.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1337..1445
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 815..880
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2206..2308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 973..1186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 577..618
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2052..2112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1685..1821
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1254..1301
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 332..361
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1457..1652
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 248..328
e-value: 3.44254E-8
score: 52.5691
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 1886..1969
e-value: 1.68459E-16
score: 76.8366
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 2121..2203
e-value: 2.31567E-12
score: 64.8954
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 684..765
e-value: 9.45865E-7
score: 47.9467
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 7..89
e-value: 1.96898E-19
score: 85.311
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 495..578
e-value: 8.02388E-13
score: 66.051
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 2313..2397
e-value: 2.19606E-6
score: 46.7911
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 143..223
e-value: 6.39622E-16
score: 75.2958
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 902..975
e-value: 0.0056
score: 25.9
coord: 503..581
e-value: 4.9E-13
score: 59.3
coord: 18..93
e-value: 6.4E-21
score: 85.5
coord: 2130..2206
e-value: 5.4E-13
score: 59.2
coord: 695..768
e-value: 1.6E-6
score: 37.7
coord: 151..226
e-value: 4.1E-16
score: 69.5
coord: 2324..2400
e-value: 6.8E-5
score: 32.3
coord: 258..331
e-value: 1.0E-6
score: 38.3
coord: 1897..1973
e-value: 2.7E-12
score: 56.8
IPR001478PDZ domainPFAMPF00595PDZcoord: 10..89
e-value: 2.0E-16
score: 60.0
coord: 149..222
e-value: 1.8E-10
score: 40.9
coord: 495..575
e-value: 1.9E-10
score: 40.8
coord: 2122..2202
e-value: 3.7E-10
score: 39.9
coord: 1889..1969
e-value: 4.7E-10
score: 39.6
IPR001478PDZ domainPROSITEPS50106PDZcoord: 494..581
score: 17.189
IPR001478PDZ domainPROSITEPS50106PDZcoord: 2315..2384
score: 10.637
IPR001478PDZ domainPROSITEPS50106PDZcoord: 892..977
score: 9.029
IPR001478PDZ domainPROSITEPS50106PDZcoord: 249..317
score: 11.079
IPR001478PDZ domainPROSITEPS50106PDZcoord: 1888..1973
score: 18.255
IPR001478PDZ domainPROSITEPS50106PDZcoord: 2121..2206
score: 17.692
IPR001478PDZ domainPROSITEPS50106PDZcoord: 141..212
score: 17.069
IPR001478PDZ domainPROSITEPS50106PDZcoord: 686..768
score: 11.119
IPR001478PDZ domainPROSITEPS50106PDZcoord: 9..93
score: 19.963
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 130..223
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 491..582
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 225..332
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 2105..2212
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 1884..1973
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 2310..2399
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 7..92
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 865..971
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 677..771

Blast
BLAST of TCONS_00001945-protein vs. Swiss-Prot (Human)
Match: MPDZ (Multiple PDZ domain protein OS=Homo sapiens GN=MPDZ PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 5.791e-27
Identity = 105/329 (31.91%), Postives = 160/329 (48.63%), Query Frame = 0
Query:    1 MKEKQDVLKLHLLKEKGKGLGIQLT--KNTDTKKKGIFISHLLEDSVAEHDGRLQIGDEILFINGQSL-LTLGHKEAVQLLHSASNPVQLVISR----KLVSEKRQSSRKPSKSDVSPELFENNNNIFIGDVESPRLYTPTSEHHTKEIILINGRDGKKLGFSMAGGAEYGSPLVVKNILAGGIASLDGRLRIGDHLLKVNDIPLDNFKYNEAVSLFKSLKQGQIKLLVK--TIRTRRSS-------NSSNDSTPRDLIDGA--------NIDV-VIKKVPGKGLGV-GFGQSSR---SGIFIKYLAKGSLAARKSLLQLKDQVVALNG 300
            M + + V    LLK    GLG  +   ++ +  + GIF+  + E SVA  DGRL+  D+IL INGQ+L  T+ H++A+ +L  A + VQLVI+R    +LVS     SR PS +         ++N             P    H + I L+N  DG  LGF + GG   G  ++VK IL GG+A   GRL  GDH+LK+ D  L      +   + +     ++KL++    I  R +        +SS  STP   +D +          DV + K V G G+ + G+    +   SGIF+K + K S       +Q+ DQ++A++G
Sbjct:  129 MAQGRHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKAKDTVQLVIARGSLPQLVSPI--VSRSPSAAST----ISAHSN-------------PVHWQHMETIELVN--DGSGLGFGIIGGKATG--VIVKTILPGGVADQHGRLCSGDHILKIGDTDLAGMSSEQVAQVLRQCGN-RVKLMIARGAIEERTAPTALGITLSSSPTSTPELRVDASTQKGEESETFDVELTKNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDG 433          
The following BLAST results are available for this feature:
BLAST of TCONS_00001945-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MPDZ5.791e-2731.91Multiple PDZ domain protein OS=Homo sapiens GN=MPD... [more]
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