TCONS_00001851-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001851-protein
Unique NameTCONS_00001851-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length505

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001851-protein ID=TCONS_00001851-protein|Name=TCONS_00001851-protein|organism=Clytia hemisphaerica|type=polypeptide|length=505bp
MRSNKVMPQNDIITVKHGQANDLNSDISFKPSFFQQPAAYQKNTLPKHND
DNEKNVDEKKDKSIKELLIEFAESTSAHGYSPLASTKTILGSVVWIISML
AAYIVLILVIQPLITKYLDRPLLNKQTVVYEHRPKFPVVVFCNENPVVRE
KYVELLTQLNETFESIDPDKAMSHVADPSIYGHRINDSILRCDFRHVKGS
CTPTSDNDANTNLGWGEYWQGRYGKCWFFNADVENPRRVTRAGHRGGLHL
HFNIEQEKYIDNTYSAGLRMFVGLQGEKFDVEEKAIPIAPGKKYDIALTK
KYIYRADPFNNGSCMRNQDKHMVEPDRKSDFHIDRMTHGFCSKLCANAAI
RDECSCVAPSLPLEYRFKDVPFCPQGDQCLDELLEKWFDGNMKCDCNPPC
EETLFSTSVYSQNYPQDIRRQREIAEGKPDPSKNLLTVSIFYEDKSFIKM
EEEQFYTIVNLIADMGGQLGLFGGFSFLTVVEFTILLVMIVIHLVMVICK
GKPKE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000978XLOC_000978Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001851TCONS_00001851Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001873ENaC
Vocabulary: Biological Process
TermDefinition
GO:0006814sodium ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005272sodium channel activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006814 sodium ion transport
cellular_component GO:0016020 membrane
molecular_function GO:0005272 sodium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001873Epithelial sodium channelPRINTSPR01078AMINACHANNELcoord: 347..364
score: 26.0
coord: 396..416
score: 25.14
coord: 466..482
score: 52.24
coord: 243..261
score: 30.74
coord: 452..466
score: 38.93
coord: 132..148
score: 37.41
IPR001873Epithelial sodium channelPFAMPF00858ASCcoord: 71..484
e-value: 1.3E-61
score: 208.9
NoneNo IPR availableGENE3D1.10.287.770coord: 430..493
e-value: 2.4E-15
score: 55.7
NoneNo IPR availableGENE3D2.60.470.10coord: 123..361
e-value: 4.4E-27
score: 94.8

Blast
BLAST of TCONS_00001851-protein vs. Swiss-Prot (Human)
Match: ASIC1 (Acid-sensing ion channel 1 OS=Homo sapiens GN=ASIC1 PE=1 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 4.544e-29
Identity = 121/488 (24.80%), Postives = 205/488 (42.01%), Query Frame = 0
Query:   53 EKNVDEKKDKSIKELLIE-FAESTSAHGYSPLASTKTI-LGSVVWIISMLAAYIVLILVIQPLITKYLDRPLLNKQTVVYEHRPKFPVVVFCNENPVVREKYV--------ELLTQLNETFE------------SIDPDKAMSHVADPSIY---------GHRINDSILRCDFRHVKGSCTPTSDNDANTNLGWGEYWQGRYGKCWFFNADVEN-PRRVTRAGHRG-GLHLHFNIEQEKYI-------DNTYSAGLRMFVGLQGEKFDVEEKAIPIAPGKKYDIALT-KKYIYRADPFNNGSCMRNQDKHMVEPDRKSDFHIDRMTHGFCSKLCANAAIRDECSCVAPSLPLEYRFKDVPFCP--QGDQCLDELLEKWFDGNMK-CDCNPPCEETLFSTSVYSQNYPQDIRRQ---REIAEGKPDPSKNLLTVSIFYEDKSFIKMEEEQFYTIVNLIADMGGQLGLFGGFSFLTVVEFTILLVMIVIH 493
            E   +E++   ++ + I+ FA S++ HG + + S + + L   +W +  L +  VL+ V    +  Y     + K   V   +  FP V  CN N     +          ELL  LN  +E             I  DKA      P  +         GH I D +L C FR   G      D               RYGKC+ FN+  +  PR  T  G  G GL +  +I+Q++Y+       + ++ AG+++ +  Q E   +++    +APG +  +A   ++ IY   P+  G+C        V  D   DF  D  +   C   C    + + C+C    +P      D P+C   Q  +C D  L+   + + + C C  PC  T +   +     P     +   ++  + +    +N+L + IF+E  ++  +E+++ Y I  L+ D+GGQ+GLF G S LTV+E       ++ H
Sbjct:    2 ELKAEEEEVGGVQPVSIQAFASSSTLHGLAHIFSYERLSLKRALWALCFLGSLAVLLCVCTERVQYYFHYHHVTKLDEVAASQLTFPAVTLCNLNEFRFSQVSKNDLYHAGELLALLNNRYEIPDTQMADEKQLEILQDKANFRSFKPKPFNMREFYDRAGHDIRDMLLSCHFR---GEVCSAEDFKVVFT---------RYGKCYTFNSGRDGRPRLKTMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPFIDQLGFGVAPGFQTFVACQEQRLIYLPPPW--GTC------KAVTMDSDLDF-FDSYSITACRIDCETRYLVENCNCRMVHMP-----GDAPYCTPEQYKECADPALDFLVEKDQEYCVCEMPCNLTRYGKELSMVKIPSKASAKYLAKKFNKSEQYIGENILVLDIFFEVLNYETIEQKKAYEIAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKH 463          
The following BLAST results are available for this feature:
BLAST of TCONS_00001851-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASIC14.544e-2924.80Acid-sensing ion channel 1 OS=Homo sapiens GN=ASIC... [more]
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