TCONS_00001838-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001838-protein
Unique NameTCONS_00001838-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1278

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001838-protein ID=TCONS_00001838-protein|Name=TCONS_00001838-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1278bp
ATLAKHGDQLNKQQFDLAGLDAKFEQQANNLADNKESLQDLTQKINENEI
KFVQTIDRLEKEFNFIQAIPQEKNDQSLEPRGLCLAEVLEHILTNIGPQE
DELLKRLGLENAEEDNVYELLKFVPWSRIKFHLERLERSDIVDYITANTL
ITEDIKLASTKLRCRYSEEVIISLANQSLSGSQETSYYNSNDMYTDLAVL
KANVVDSEIDNSDRKALMEQRYFDKESIELDDLFQQKNDTVFVRGVGGMG
KTTMLEMYTLKWAKKELELDLPLEFIFLFSCRELNRLTGRITSIEDLFTE
KYPEIFSIVSLENLAQIADRVLIIIDGLDEVHGVYETEVSKNSPSLTSIQ
ILSELINTQGPLLKGHKCIACGRPKACDFIKRKIHQMERHSTKVATNIKT
VEVCGFSKANVEKYIEKFFAGNTEKVNRVREAIKTSENLRVMASVPVFIW
VIVNVYSEDLITKPLNTHTELYMYACLVFLRNHMHGVGTKDYKTLIELLE
DNTIFEVVYSLMTLSVKTYMNNKVLFTEQDIKSLNCPIHLEQTGLIVKYS
RGEIQEPIYQFKHIVLQEFLTGLFFCVTKGISPYLTNRELSSCSPIIFGI
LRLLEENDNKLFVEFFTRLTGVHRMKSSLFKRIQGTFQARTFQKFISRNT
IEFPKCMIYFDSLVIDTTIPECQEFLTVFYEAKFKIECPFATVEIFGCPI
GIEKRNIVFLIWYLNLELKLPNCMWSCSGLSLTTKPECNHFISLYYGNGD
RIKVQNHFRKLTIDEPISNFNKEEILYLIEKLNLKSLEIPRYMFTSSRER
TELTIDARNLQCYQFIEFVCENKLNVECDGFKMVELRGKFNEKSRRNAFF
LMDQLELSLKIPESMILNDTLTMDDRVNHITFLDAFQHGRKISTHGLQGV
IKAQIMPSFVSKHPLEPYAVLLHHLQILEIKVPPSMIYNRDSVIIDADSK
KCMACLKLFTCLAKLTEKIRTIKESFPELKYANVRFDKIGDYDSVACFIS
KCGLLIRLPPTMTISSCVFFSDGERYNFDNFYNLLKYDGIQCALGGVTHF
SVFDTEFEESWLQKLKFIVSKLRLDLELPHNFLKGKDVCIKSDRDQIRFF
KIANILPSTIERPFNPKYASIYSLPPDTREVSTFIKYHNLTVKIPDQLLM
ADGILNLDFNLPLTTPFLKMIYEENLTLQNENLNHVKIIGETSIDVLNAV
VSLITNLKLNILAPEKQFNDYGLFTIDITVPESFNFIYVVPRIQQNVDHL
HFYVKHFCSEDEIVEEFLQHICYSCYYE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000972XLOC_000972Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001838TCONS_00001838Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007111NACHT_NTPase
IPR027417P-loop_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 21..51
NoneNo IPR availableGENE3D3.40.50.300coord: 203..395
e-value: 0.0015
score: 17.8
NoneNo IPR availablePFAMPF05729NACHTcoord: 239..420
e-value: 1.6E-21
score: 76.9
IPR007111NACHT nucleoside triphosphatasePROSITEPS50837NACHTcoord: 239..331
score: 13.835
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 230..418

Blast
[Close]
BLAST of TCONS_00001838-protein vs. Swiss-Prot (Human)
Match: NLRP3 (NACHT, LRR and PYD domains-containing protein 3 OS=Homo sapiens GN=NLRP3 PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 2.364e-17
Identity = 84/363 (23.14%), Postives = 155/363 (42.70%), Query Frame = 0 
Query:  231 DDLFQQKNDTVFVRGVGGMGKTTMLEMYTLKWAKKELELDLPLEFIFLFSCRELNRLTGRITSIEDLFTEKYPEIFSIVSLENLAQIADRVLIIIDGLDEVHGVYETEVSKNSPSLTSIQ-------ILSELINTQGPLLKGHKCIACGRPKACDFIKRKIHQMERHSTKVATNIKTVEVCGFSKANVEKYIEKFFAGNTEKVNRVREAIKTSENLRVMASVPVFIWVIVNVYSEDL-----ITKPLNTHTELYMYACLVFLRNHMHGVGTKDYKTLIELLEDNTIFEVVYSLMTLSVKTYMNNKVLFTEQDIKSLNCPIHLEQTGLIVKYSRGEI------QEPIYQFKHIVLQEFLTGLFF 575
            DD   +   TV  +G  G+GKT +     L WA   L  D   +++F   CRE++ +T R  S+ DL     P+      +  + +   R+L ++DG DE+ G ++  +    P  T  Q       +LS LI  +  LL     +   RP A +    K+  +  H        + VE+ GFS+A  ++Y  K+F+ +  +       I+ +E L  M  +P+  W++     + +     + +   T T +Y++    FL + +   G           +++ +   ++ L +L+     N K+LF E D+++     H  Q   +  + R  +       E  Y F H+  QEF   +++
Sbjct:  212 DDEHSEPVHTVVFQGAAGIGKTILARKMMLDWASGTLYQD-RFDYLFYIHCREVSLVTQR--SLGDLIMSCCPD--PNPPIHKIVRKPSRILFLMDGFDELQGAFDEHI---GPLCTDWQKAERGDILLSSLIRKK--LLPEASLLITTRPVALE----KLQHLLDHP-------RHVEILGFSEAKRKEYFFKYFS-DEAQARAAFSLIQENEVLFTMCFIPLVCWIVCTGLKQQMESGKSLAQTSKTTTAVYVF----FLSSLLQPRGGS---------QEHGLCAHLWGLCSLAADGIWNQKILFEESDLRN-----HGLQKADVSAFLRMNLFQKEVDCEKFYSFIHMTFQEFFAAMYY 534
The following BLAST results are available for this feature:
BLAST of TCONS_00001838-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NLRP32.364e-1723.14NACHT, LRR and PYD domains-containing protein 3 OS... [more]
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