TCONS_00001687-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00001687-protein
Unique Name	TCONS_00001687-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	327

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00001687-protein ID=TCONS_00001687-protein|Name=TCONS_00001687-protein|organism=Clytia hemisphaerica|type=polypeptide|length=327bp
MFSAXPLDQNQNICMYKTKISCKEVPPFKTNMYVSLRPIPKDKLKDAVNC
TLNTDFAHGAPIHIGNPESIGIPNLSENIMDVKIDLAEDEIPAFWACGIT
SGYAVKSAGLAQCFAHSPGGMFVSDVFSHNVSDIVPTTLYPEAELLEMKQ
KVYQILSKPSLDAIRRIENEIMEDIGQRGITNLLVKDDFCRTCLDLAANG
DHVGIIFGFPCFEGEDPVEENDGVAGAIYIANALLKLGKSVTFIVDNVSL
TLKNFLLEQMPKCQIKSVGTDFTNDNKDFLYDTDTSKPLFSHLLAIERPS
PSVDGTCRGMNGRLINVEPTHLLFLQG

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000879	XLOC_000879	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00001687	TCONS_00001687	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009906	DUF1445
IPR025504	DUF4392

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.2040.10		coord: 2..105 e-value: 3.2E-28 score: 97.7
None	No IPR available	SUPERFAMILY	160920	PSTPO5379-like	coord: 6..126
IPR009906	Protein of unknown function DUF1445	PFAM	PF07286	DUF1445	coord: 7..125 e-value: 9.8E-35 score: 119.5
IPR025504	Domain of unknown function DUF4392	PFAM	PF14336	DUF4392	coord: 167..325 e-value: 3.7E-25 score: 88.8

Blast

[Close]

BLAST of TCONS_00001687-protein vs. Swiss-Prot (Human)
Match: GLUCM (D-glutamate cyclase, mitochondrial OS=Homo sapiens GN=C14orf159 PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.749e-33
Identity = 105/324 (32.41%), Postives = 148/324 (45.68%), Query Frame = 0

Query:   17 KTKISCKEVPPFKTNMYVSLRPIPKDKLKDAVNCTLNTDFAHGAPIHIGNPESIGIPNLSENIMDVKIDLAEDEIPAFWACGITSGYAVKSAGLAQCFAHSPGGMFVSDVFSHNVSDIVPTTLYPE--AELLEMKQKV--YQILSKPSLDAIRRIENEIMEDIGQRGITNLLVKDDFCRTCLDLAANGDHVGIIFGFPCFEGEDPVEENDGVAGAIYIANALLKLGKSVTFIVDNVSLTLKNFLLEQ-----MPKCQIKSV---GTDFTNDNKDFLYDTDTSKPLFSHLLAIERPSPSVDG---TCRGMNGRLINVEPTHLLFL 325
            +T + C     F   + V++RPIPKDKL+  V    +     G P+H+G+PE +GI  LS+      +     E+P FW   +TS  AV S      FA  PG   ++D+     +   P  L PE   E+  + Q    Y I S  +   IR +E+ I  D G RGI +LL KD+  +  L L ++   V I  GFP     +P EE DG  GA+ +   L  L K V  IVD  +  L   ++E      + K QI  +   G            + D   P F HL+AIER   + DG     R MN + + V+P   LFL
Sbjct:  147 QTTVPCVTHAGFCCPLVVTMRPIPKDKLEGLVRACCSLGGEQGQPVHMGDPELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAVSSCETPLAFASIPGCTVMTDL---KDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKIRELESMIGIDPGNRGIGHLLCKDELLKASLSL-SHARSVLITTGFPTHFNHEPPEETDGPPGAVALVAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQAFLCKNGDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHL-VDPIDDLFL 465

The following BLAST results are available for this feature:

BLAST of TCONS_00001687-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00001687-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GLUCM	2.749e-33	32.41	D-glutamate cyclase, mitochondrial OS=Homo sapiens...	[more]

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TCONS_00001687-protein (polypeptide) - C. hemisphaerica