TCONS_00001687-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001687-protein
Unique NameTCONS_00001687-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length327

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001687-protein ID=TCONS_00001687-protein|Name=TCONS_00001687-protein|organism=Clytia hemisphaerica|type=polypeptide|length=327bp
MFSAXPLDQNQNICMYKTKISCKEVPPFKTNMYVSLRPIPKDKLKDAVNC
TLNTDFAHGAPIHIGNPESIGIPNLSENIMDVKIDLAEDEIPAFWACGIT
SGYAVKSAGLAQCFAHSPGGMFVSDVFSHNVSDIVPTTLYPEAELLEMKQ
KVYQILSKPSLDAIRRIENEIMEDIGQRGITNLLVKDDFCRTCLDLAANG
DHVGIIFGFPCFEGEDPVEENDGVAGAIYIANALLKLGKSVTFIVDNVSL
TLKNFLLEQMPKCQIKSVGTDFTNDNKDFLYDTDTSKPLFSHLLAIERPS
PSVDGTCRGMNGRLINVEPTHLLFLQG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000879XLOC_000879Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001687TCONS_00001687Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009906DUF1445
IPR025504DUF4392
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2040.10coord: 2..105
e-value: 3.2E-28
score: 97.7
NoneNo IPR availableSUPERFAMILY160920PSTPO5379-likecoord: 6..126
IPR009906Protein of unknown function DUF1445PFAMPF07286DUF1445coord: 7..125
e-value: 9.8E-35
score: 119.5
IPR025504Domain of unknown function DUF4392PFAMPF14336DUF4392coord: 167..325
e-value: 3.7E-25
score: 88.8

Blast
BLAST of TCONS_00001687-protein vs. Swiss-Prot (Human)
Match: GLUCM (D-glutamate cyclase, mitochondrial OS=Homo sapiens GN=C14orf159 PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.749e-33
Identity = 105/324 (32.41%), Postives = 148/324 (45.68%), Query Frame = 0
Query:   17 KTKISCKEVPPFKTNMYVSLRPIPKDKLKDAVNCTLNTDFAHGAPIHIGNPESIGIPNLSENIMDVKIDLAEDEIPAFWACGITSGYAVKSAGLAQCFAHSPGGMFVSDVFSHNVSDIVPTTLYPE--AELLEMKQKV--YQILSKPSLDAIRRIENEIMEDIGQRGITNLLVKDDFCRTCLDLAANGDHVGIIFGFPCFEGEDPVEENDGVAGAIYIANALLKLGKSVTFIVDNVSLTLKNFLLEQ-----MPKCQIKSV---GTDFTNDNKDFLYDTDTSKPLFSHLLAIERPSPSVDG---TCRGMNGRLINVEPTHLLFL 325
            +T + C     F   + V++RPIPKDKL+  V    +     G P+H+G+PE +GI  LS+      +     E+P FW   +TS  AV S      FA  PG   ++D+     +   P  L PE   E+  + Q    Y I S  +   IR +E+ I  D G RGI +LL KD+  +  L L ++   V I  GFP     +P EE DG  GA+ +   L  L K V  IVD  +  L   ++E      + K QI  +   G            + D   P F HL+AIER   + DG     R MN + + V+P   LFL
Sbjct:  147 QTTVPCVTHAGFCCPLVVTMRPIPKDKLEGLVRACCSLGGEQGQPVHMGDPELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAVSSCETPLAFASIPGCTVMTDL---KDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKIRELESMIGIDPGNRGIGHLLCKDELLKASLSL-SHARSVLITTGFPTHFNHEPPEETDGPPGAVALVAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQAFLCKNGDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHL-VDPIDDLFL 465          
The following BLAST results are available for this feature:
BLAST of TCONS_00001687-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GLUCM2.749e-3332.41D-glutamate cyclase, mitochondrial OS=Homo sapiens... [more]
back to top