TCONS_00001647-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001647-protein
Unique NameTCONS_00001647-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length618

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001647-protein ID=TCONS_00001647-protein|Name=TCONS_00001647-protein|organism=Clytia hemisphaerica|type=polypeptide|length=618bp
MIVENNAVIQPSTSTIDENAVVETQVPIITSPVPTNLTDDNKELNKNSNE
DIATENLSLISSSVQETIVADTSFKIESNEQTATISSFLPTENLIKTEIL
SADDTSVQQPTPQLNQSFTEENQTTSNTSFLRNPNENVVALQETPTNIVS
LVPSLSFATNAGNSSNKKVIVLQNDGQTVLIEQHPTAIAATNEQVAPILD
QGESPVNESRHKGTKIVDGAKPSVLASSLKPPTISKVQVKCDTCEKVLSS
RNALREHRILVHLKNGRFACGSCDKRFSSNYALNLHSLSHSKERNYVCDK
CGSSHKRARELRNHVKDMHTDDKTYRCDVCFECFKEKFLLKSHCQSTHKD
TVTNCVVCKHKLMTPTSIYFHSLQHAGVRDHKCGTCDNAFKTSKALKKHQ
STHDPERRPYKDCPKCGKSFLSRSSYYEHYHLHDEESEKYRCDYCDSGFK
HSSSLKRHAVRHRPGGDLEFPKENPYAEMDEALLPSLCCRKCRKLYTSKS
GYYDHLKKCQYGVVESFKCDFCERVYTKRSALNRHVRQTHPDIHAHLLEG
TITDATVVEPVDGSETMTVDIQPTTVEVINTGVGDENEVQIQFQVALAPH
KEGITETGVEEVEMTSEP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000859XLOC_000859Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001647TCONS_00001647Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR003656Znf_BED
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 296..319
e-value: 0.02
score: 24.0
coord: 325..348
e-value: 1.6
score: 17.7
coord: 353..375
e-value: 100.0
score: 4.4
coord: 381..403
e-value: 0.046
score: 22.9
coord: 268..290
e-value: 0.25
score: 20.4
coord: 517..540
e-value: 5.6E-4
score: 29.2
coord: 487..507
e-value: 250.0
score: 1.0
coord: 440..462
e-value: 0.01
score: 25.0
coord: 239..262
e-value: 0.062
score: 22.4
coord: 411..433
e-value: 0.61
score: 19.1
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 327..348
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 413..433
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 270..290
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 383..403
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 442..462
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 519..540
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 241..262
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 239..262
score: 8.725
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 268..295
score: 11.759
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 296..324
score: 11.635
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 381..408
score: 11.448
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 325..353
score: 8.891
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 517..540
score: 11.032
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 440..462
score: 10.159
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 411..438
score: 11.136
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 277..334
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 516..541
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 240..290
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 413..462
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 375..429
IPR003656Zinc finger, BED-typeSMARTSM00614bed5coord: 421..465
e-value: 0.47
score: 7.7
coord: 497..543
e-value: 0.034
score: 17.6
NoneNo IPR availableGENE3D3.30.160.60coord: 487..527
e-value: 1.1E-4
score: 22.0
coord: 250..279
e-value: 9.2E-10
score: 38.2
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 517..540
e-value: 0.0026
score: 18.0
coord: 440..462
e-value: 0.0022
score: 18.2
coord: 381..403
e-value: 0.0012
score: 19.1
NoneNo IPR availableGENE3D3.30.160.60coord: 430..450
e-value: 3.1E-7
score: 29.8
NoneNo IPR availableGENE3D3.30.160.60coord: 451..486
e-value: 5.2E-5
score: 22.6
coord: 415..429
e-value: 0.0023
score: 17.3
NoneNo IPR availableGENE3D3.30.160.60coord: 310..352
e-value: 1.7E-8
score: 34.2
coord: 280..309
e-value: 1.4E-11
score: 44.1
NoneNo IPR availableGENE3D3.30.160.60coord: 353..390
e-value: 1.6E-6
score: 27.7
NoneNo IPR availableGENE3D2.20.28.10coord: 391..414
e-value: 2.0E-7
score: 30.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..128
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 528..587
e-value: 0.0025
score: 17.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 101..249
e-value: 0.29
score: 10.9

Blast
BLAST of TCONS_00001647-protein vs. Swiss-Prot (Human)
Match: ZN782 (Zinc finger protein 782 OS=Homo sapiens GN=ZNF782 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.923e-31
Identity = 90/303 (29.70%), Postives = 142/303 (46.86%), Query Frame = 0
Query:  239 VKCDTCEKVLSSRNALREHRILVHLKNGRFACGSCDKRFSSNYALNLHSLSHSKERNYVCDKCGSSHKRARELRNHVKDMHTDDKTYRCDVCFECFKEKFLLKSHCQSTHKDTVTNCVVCKHKLMTPTSIYFHSLQHAGVRDHKCGTCDNAFKTSKALKKHQSTHDPERRPYKDCPKCGKSFLSRSSYYEHYHLHDEESEKYRCDYCDSGFKHSSSLKRHAVRHRPGGDLEFPKENPYAEMDEALLPSLCCRKCRKLYTSKSGYYDHLKKCQYGVVESFKCDFCERVYTKRSALNRHVRQTHP 541
             KCD C+K  S+++ LR H+   H     F C  C K F+    L +H  +H+ E+ + C++CG S      LRNH +  HT ++ Y+CD C + FK K  L+ H ++   +    C  C       + +  H   H G + +KC  C  AF     L+ H  TH  E +PY+ C +CGK+F  +S+   H   H  E + Y C+ C   F   S L++H   H          E PY            C +C + ++ KS    H +   +   + +KCD C R ++++S+L  H ++ HP
Sbjct:  422 YKCDGCDKAFSAKSGLRIHQ-RTHTGEKPFECHECGKSFNYKSILIVHQRTHTGEKPFECNECGKSFSHMSGLRNH-RRTHTGERPYKCDECGKAFKLKSGLRKHHRTHTGEKPYKCNQCGKAFGQKSQLRGHHRIHTGEKPYKCNHCGEAFSQKSNLRVHHRTHTGE-KPYQ-CEECGKTFRQKSNLRGHQRTHTGE-KPYECNECGKAFSEKSVLRKHQRTH--------TGEKPYN-----------CNQCGEAFSQKSNLRVHQR--THTGEKPYKCDKCGRTFSQKSSLREH-QKAHP 697          

HSP 2 Score: 117.857 bits (294), Expect = 1.368e-27
Identity = 73/227 (32.16%), Postives = 112/227 (49.34%), Query Frame = 0
Query:  239 VKCDTCEKVLSSRNALREHRILVHLKNGRFACGSCDKRFSSNYALNLHSLSHSKERNYVCDKCGSSHKRARELRNHVKDMHTDDKTYRCDVCFECFKEKFLLKSHCQSTHKDTVTNCVVCKHKLMTPTSIYFHSLQHAGVRDHKCGTCDNAFKTSKALKKHQSTHDPERRPYKDCPKCGKSFLSRSSYYEHYHLHDEESEKYRCDYCDSGFKHSSSLKRHAVRHRPG 465
             +C+ C K  S  + LR HR   H     + C  C K F     L  H  +H+ E+ Y C++CG +  +  +LR H + +HT +K Y+C+ C E F +K  L+ H ++   +    C  C       +++  H   H G + ++C  C  AF     L+KHQ TH  E +PY +C +CG++F  +S+   H   H  E + Y+CD C   F   SSL+ H   H PG
Sbjct:  478 FECNECGKSFSHMSGLRNHR-RTHTGERPYKCDECGKAFKLKSGLRKHHRTHTGEKPYKCNQCGKAFGQKSQLRGHHR-IHTGEKPYKCNHCGEAFSQKSNLRVHHRTHTGEKPYQCEECGKTFRQKSNLRGHQRTHTGEKPYECNECGKAFSEKSVLRKHQRTHTGE-KPY-NCNQCGEAFSQKSNLRVHQRTHTGE-KPYKCDKCGRTFSQKSSLREHQKAH-PG 698          

HSP 3 Score: 110.153 bits (274), Expect = 3.898e-25
Identity = 83/299 (27.76%), Postives = 131/299 (43.81%), Query Frame = 0
Query:  239 VKCDTCEKVLSSRNALREHRILVHLKNGRFACGSCDKRFSSNYALNLHSLSHSKERNYVCDKCGSSHKRARELRNHVKDMHTDDKTYRCDVCFECFKEKFLLKSHCQSTHKDTVTNCVVCKHKLMTPTSIYFHSLQHAGVRDHKCGTCDNAFKTSKALKKHQSTHDPERRPYKDCPKCGKSFLSRSSYYEHYHLHDEESEKYRCDYCDSGFKHSSSLKRHAVRHRPGGDLEFPKENPYAEMDEALLPSLCCRKCRKLYTSKSGYYDHLKKCQYGVVESFKCDFCERVYTKRSALNRHVR 537
             +C  C K  S ++ LR+H+   H     + C  CDK FS+   L +H  +H+ E+ + C +CG S      L  H +  HT +K + C+ C + F            +H   + N                H   H G R +KC  C  AFK    L+KH  TH  E +PYK C +CGK+F  +S    H+ +H  E + Y+C++C   F   S+L+ H   H          E PY            C +C K +  KS    H +   +   + ++C+ C + ++++S L +H R
Sbjct:  394 YECPECGKAFSEKSRLRKHQ-RTHTGEKPYKCDGCDKAFSAKSGLRIHQRTHTGEKPFECHECGKSFNYKSILIVHQR-THTGEKPFECNECGKSF------------SHMSGLRN----------------HRRTHTGERPYKCDECGKAFKLKSGLRKHHRTHTGE-KPYK-CNQCGKAFGQKSQLRGHHRIHTGE-KPYKCNHCGEAFSQKSNLRVHHRTH--------TGEKPYQ-----------CEECGKTFRQKSNLRGHQR--THTGEKPYECNECGKAFSEKSVLRKHQR 638          
The following BLAST results are available for this feature:
BLAST of TCONS_00001647-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN7824.923e-3129.70Zinc finger protein 782 OS=Homo sapiens GN=ZNF782 ... [more]
back to top