TCONS_00001632-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001632-protein
Unique NameTCONS_00001632-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length305

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001632-protein ID=TCONS_00001632-protein|Name=TCONS_00001632-protein|organism=Clytia hemisphaerica|type=polypeptide|length=305bp
MVYYREFGYSDHFPKPGETLCGSSFSVGCGGKGANQCVMAAKLGANVAMI
SSVGDDNFGEMFLKEFKKENVNIECMHIEAGISTGVAQILVNKEGENCII
IVKGANGRLTTEHVQQKCADVIKKAKVVMFQLEIDLNVTLTSIKFCKENG
CFTIFNPAPAVSNLSDDFLKYTTLLCCNETEAEILSGLQVDSPEKRQGAI
KGLLQKGPEYVVLTLGSQGAMFAQKGGSIQHVVPDQSVVPDKIVDTTGAG
DCFVGSLAFMIARREDLSFNEKVQRAVNIASISVGKPGTQTSYPSLMDLP
ESLRM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000848XLOC_000848Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001632TCONS_00001632Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002139Ribo/fructo_kinase
IPR029056Ribokinase-like
IPR011877D_ribokin
IPR011611PfkB_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0004747ribokinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006014D-ribose metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006014 D-ribose metabolic process
molecular_function GO:0016301 kinase activity
molecular_function GO:0004747 ribokinase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002139Ribokinase/fructokinasePRINTSPR00990RIBOKINASEcoord: 167..182
score: 35.42
coord: 97..110
score: 50.0
coord: 25..44
score: 59.44
coord: 211..222
score: 48.15
IPR029056Ribokinase-likeGENE3D3.40.1190.20coord: 1..305
e-value: 9.7E-63
score: 211.9
IPR029056Ribokinase-likeSUPERFAMILY53613Ribokinase-likecoord: 7..300
IPR011877RibokinaseTIGRFAMTIGR02152TIGR02152coord: 10..299
e-value: 9.3E-92
score: 305.5
IPR011877RibokinaseHAMAPMF_01987Ribokinasecoord: 2..302
score: 22.913
IPR011877RibokinaseCDDcd01174ribokinasecoord: 9..295
e-value: 5.86283E-113
score: 330.281
IPR011611Carbohydrate kinase PfkBPFAMPF00294PfkBcoord: 13..295
e-value: 1.8E-61
score: 208.0
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..29
score: 5.0

Blast
[Close]
BLAST of TCONS_00001632-protein vs. Swiss-Prot (Human)
Match: RBSK (Ribokinase OS=Homo sapiens GN=RBKS PE=1 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 7.013e-76
Identity = 128/295 (43.39%), Postives = 188/295 (63.73%), Query Frame = 0 
Query:   10 SDHFPKPGETLCGSSFSVGCGGKGANQCVMAAKLGANVAMISSVGDDNFGEMFLKEFKKENVNIECMHIEAGISTGVAQILVNKEGENCIIIVKGANGRLTTEHVQQKCADVIKKAKVVMFQLEIDLNVTLTSIKFCKENGCFTIFNPAPAVSNLSDDFLKYTTLLCCNETEAEILSGLQVDSPEKRQGAIKGLLQKGPEYVVLTLGSQG-AMFAQKGGSIQHVVPDQSVVPDKIVDTTGAGDCFVGSLAFMIARREDLSFNEKVQRAVNIASISVGKPGTQTSYPSLMDLPESL 303
            +   PK GET+ G  F +G GGKGANQCV AA+LGA  +M+  VG D+FG  +++  K+ +++ E  +     +TG A I+VN EG+N I+IV GAN  L TE + +  A+VI +AKV++ QLEI    +L ++   + +G  T+FNPAPA+++L   F   + + CCNE+EAEIL+GL V S      A   LL++G + V++TLG++G  + +Q     +H +P + V   K VDTTGAGD FVG+LAF +A   +LS  + + R+  IA++SV   GTQ+SYP   DLP +L
Sbjct:   32 TSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDL-RAAANVISRAKVMVCQLEITPATSLEALTMARRSGVKTLFNPAPAIADLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKH-IPTEKV---KAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNRSNFIAAVSVQAAGTQSSYPYKKDLPLTL 321
The following BLAST results are available for this feature:
BLAST of TCONS_00001632-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RBSK7.013e-7643.39Ribokinase OS=Homo sapiens GN=RBKS PE=1 SV=1[more]
back to top