TCONS_00001102-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00001102-protein
Unique Name	TCONS_00001102-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1221

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00001102-protein ID=TCONS_00001102-protein|Name=TCONS_00001102-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1221bp
MLSQKSSSTPCKNKLKISNTRTKAKDNETSTNKVKSAQAAKSANESDDII
DVTPDKGSKKLKLKLSKINSHSKRATEKLKTQNAKAAVKHGLEDITSGIS
PIAKSVTQRRKLSLKKPLKRRCSFSPKDAEKDSKKNKVTKEETDDTLEDL
TKYLPSNNQKKQLDIKSFFSKPRNTNHTQVQTKVEKDDLNLDETSNDSLL
GLVSDNLVNGTLDTCKKEKASKSFEFDLNDSLNLEEVVSTQKTSAEIKHV
FMTWRVVEYSVREYQVDNHRKQERVLQLLQIKNEEERAVCHLRDDWFLME
IEDEDIAYVSNLNDACRRSILCNNSKEFITVFPNTLISGTTIASGITCER
QAVLNTRFKTEGQNEVMLVGTLTHEIFQWAISNNKFEMKDLVTKMNELLQ
QTKVLETLYTLDIDEQQIASKLKEYLPQVGLWKRNYLQDSQTSADESKPS
ITNIVDIEENVWSPYLGFKGKVDVSVEVKIHKRSRDKILAPLELKTGKML
SNLGSVEHRAQVTVYCLLMSERHHQPIDSGLLYYFKTNHLQQVPMPEQEK
RAILIKRNDIARRLTLEREEQQLPALSRNKRICKWCPQKQTCLLHFKSRE
NGESWTSGIEEIYKNVLSNLKDEDFRYFSKWYELLLLEAYYECTANKTSY
IWAKSSERRELQGVCFSHMLVCTSDVTSDMKYHYTFERCVNHFNQQTPMN
IIPLIAGDRVIVSRENNRVFNETTGYILQVSENEVIVSAHQKLQKTDKVL
YRIDKDETLSSLTTPLTNLANLFRVDSQLDNKLRQSIIHNKTPTVDIDPP
VEENSEITGNLNEGQKQAICRCLQAKDFVMILGMPGSGKSTTTALLVQSL
VCKGKKVLLTSYTHSAVDTILLKLLENGFTKFTRLGLPQRMHAKIRKYTA
HEQTKLFTKTHQIKEYYEKQSVFASTCLGVNNPILAKHHFDYCIVDEASQ
ITQPVCIGAVRLADVFVLIGDHNQLPPLVQSEKARSRGMDVSLFKYLSDE
QPEAVVTLNQQYRMNKHIMSLANTLVYQNKMKCGNESIANAVLSLPHFND
VNLDSDMKRIIDPVHPVIFVDTDQRPDCEETIRSKKLVNTGEAILCEQII
SSLLKAGLVESNLGVICPYRHQLKIIKDEISSLQNSKQIEVETIDKYQGK
DKECIIVTFVRSNNKQEVGELLLDWRRINVALTRAKKKLILIGSRKTITG
STVLNQMLKILDDKKWTFIYS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000619	XLOC_000619	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00001102	TCONS_00001102	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014808	DNA_replication_fac_Dna2_N
IPR022765	Dna2/Cas4_DUF83
IPR027417	P-loop_NTPase

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014808	DNA replication factor Dna2, N-terminal	PFAM	PF08696	Dna2	coord: 283..478 e-value: 3.1E-49 score: 167.5
None	No IPR available	GENE3D	3.40.50.300		coord: 804..1018 e-value: 1.5E-31 score: 108.8
None	No IPR available	GENE3D	3.40.50.300		coord: 1019..1215 e-value: 4.1E-33 score: 113.8
None	No IPR available	PFAM	PF13087	AAA_12	coord: 989..1195 e-value: 7.6E-54 score: 182.3
None	No IPR available	PFAM	PF13086	AAA_11	coord: 910..982 e-value: 5.0E-15 score: 55.9 coord: 810..904 e-value: 1.2E-11 score: 44.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..56
None	No IPR available	CDD	cd01983	Fer4_NifH	coord: 829..859 e-value: 5.38704E-5 score: 42.0049
IPR022765	Dna2/Cas4, domain of unknown function DUF83	PFAM	PF01930	Cas_Cas4	coord: 483..593 e-value: 4.0E-7 score: 30.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 807..1198

Blast

[Close]

BLAST of TCONS_00001102-protein vs. Swiss-Prot (Human)
Match: DNA2 (DNA replication ATP-dependent helicase/nuclease DNA2 OS=Homo sapiens GN=DNA2 PE=1 SV=3)

HSP 1 Score: 590.882 bits (1522), Expect = 0.000e+0
Identity = 371/986 (37.63%), Postives = 567/986 (57.51%), Query Frame = 0

Query:  285 EERAVCHLRDDWFLMEIEDEDIAYVSNLNDACRRSILCNNSKEFITVFPNTLISGTTIASGITCERQAVLNTRFKT-EGQNEVMLVGTLTHEIFQWAISNNKFEMKDLVTKMNELLQQTKVLETLYTLDIDEQQIASKLKEYLPQVGLWKRNYLQDSQTS----------ADESKP-SITNI-----VDIEENVWSPYLGFKGKVDVSVEVKIHKRSRDKI-LAPLELKTGKMLSNLGSVEHRAQVTVYCLLMSERHHQPIDSGLLYYFKTNHLQQVPMPEQEKRAILIKRNDIARRL------TLEREEQQL---PALSRNKRICKWCPQKQTCLLHFKSRENGESWTS-------GIEEIYKNVLSNLKDEDFRYFSKWYELLLLEAYYECTANKTSYIWAKSSERRELQGVCFSHMLVCTS-DVTSDMKYHYTFERCVNHFNQQTPMNIIPLIAGDRVIVSRENNRVFNETTGYILQVSENEVIVSAHQKLQK-TDKVLYRIDKDETLSSLTTPLTNLANLFRVDSQLDNKLRQSIIHNKTPTV-----DIDPPVEENSE--ITGNLNEGQKQAICRCLQAKDFVMILGMPGSGKSTTTALLVQSLVCKGKKVLLTSYTHSAVDTILLKLLENGFTKFTRLGLPQRMHAKIRKYTAHE--QTKLFTKTHQIKEYYEKQSVFASTCLGVNNPILAKHHFDYCIVDEASQITQPVCIGAVRLADVFVLIGDHNQLPPLVQSEKARSRGMDVSLFKYLSDEQPEAVVTLNQQYRMNKHIMSLANTLVYQNKMKCGNESIANAVLSLPHFNDVNLD-------SD---MKRIIDPVHPVIFVDTDQRPDCEETIRSKKLVNTGEAILCEQIISSLLKAGLVESNLGVICPYRHQLKIIKDEISSLQNSKQIEVETIDKYQGKDKECIIVTFVRSNNKQEVGELLLDWRRINVALTRAKKKLILIGSRKTITGSTVLNQMLKILDDKK 1215
            E + +C LR+DW  + +E  DI ++    D    + + +    ++ ++P+ LISGT+IAS I C R+AVL+  F++ +     ML+GT+ HE+FQ AI NN F  + L     + +Q+ + L+ +Y L++ + +I  ++++YLP    W  +++  + ++          +D SK  S  NI     +DIEE++WSP  G KGK+DV+V VKIH+  + K  + PLELKTGK  SN  S+EHR+QV +Y LL  ER   P ++GLL Y KT  +  VP    +KR +L  RN +A  L      +  R++ QL   P +   ++ CK+C Q   C L+ ++ E     +S        IEE  ++    LK     YFS W  +L LE+  +        IW   +   E  G C  +++      +  D +Y + F+ C     +   + +  L+AGDRVIVS E   +F  + GY+ +++   V     + L    +  L+R+D++E    + TPL NL+ L   ++ +  KLR  II  + P        + P   +++   I   LN+ Q+QA+ + L +KD+ +I+GMPG+GK+TT   LV+ L   G  VLLTSYTHSAVD ILLKL +     F RLG  Q++H  I+++T  E  ++K       ++E Y  Q + A+TC+G+N+PI ++  FD+CIVDEASQI+QP+C+G +  +  FVL+GDH QLPPLV + +AR+ GM  SLFK L ++   AVV L  QYRMN  IMSL+N L Y+ K++CG++ +ANAV++L HF DV L+       SD   +  + +P +PV F++TD+ P   E +    + N  EA L   + S  +KAG   S++G+I PYR QLKII D ++  ++   +EV T+DKYQG+DK  ++V+FVRSN    VGELL DWRR+NVA+TRAK KLIL+G   ++     L ++L  L+ +K
Sbjct:   75 ENKELCILRNDWCSVPVEPGDIIHLEG--DCTSDTWIIDKDFGYLILYPDMLISGTSIASSIRCMRRAVLSETFRSSDPATRQMLIGTVLHEVFQKAI-NNSFAPEKLQELAFQTIQEIRHLKEMYRLNLSQDEIKQEVEDYLPSFCKWAGDFMHKNTSTDFPQMQLSLPSDNSKDNSTCNIEVVKPMDIEESIWSPRFGLKGKIDVTVGVKIHRGYKTKYKIMPLELKTGKE-SN--SIEHRSQVVLYTLLSQERRADP-EAGLLLYLKTGQMYPVPANHLDKRELLKLRNQMAFSLFHRISKSATRQKTQLASLPQIIEEEKTCKYCSQIGNCALYSRAVEQQMDCSSVPIVMLPKIEEETQH----LKQTHLEYFSLWCLMLTLESQSKDNKKNHQNIWLMPASEMEKSGSCIGNLIRMEHVKIVCDGQYLHNFQ-C-----KHGAIPVTNLMAGDRVIVSGEERSLFALSRGYVKEINMTTVTCLLDRNLSVLPESTLFRLDQEEKNCDIDTPLGNLSKLME-NTFVSKKLRDLIIDFREPQFISYLSSVLPHDAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIG-FLRLGQIQKVHPAIQQFTEQEICRSKSIKSLALLEELYNSQLIVATTCMGINHPIFSRKIFDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRL-EQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKDVKLELEFYADYSDNPWLMGVFEPNNPVCFLNTDKVP-APEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLA--RSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHLNSEK 1037

The following BLAST results are available for this feature:

BLAST of TCONS_00001102-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00001102-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DNA2	0.000e+0	37.63	DNA replication ATP-dependent helicase/nuclease DN...	[more]

You are here

TCONS_00001102-protein (polypeptide) - C. hemisphaerica