TCONS_00001003-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001003-protein
Unique NameTCONS_00001003-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1099

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001003-protein ID=TCONS_00001003-protein|Name=TCONS_00001003-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1099bp
MSTPLKKRVRPSTASGLIQSSRIPHILDDIRPNTAIGAKEPVLGLEPTYI
TADLRIGHKLLNSKYTGKQVHGGVDDRNLKSEHGRRNTIGPVDFISNDKT
LRPFTAPISENSAKIEERITLDHLNKIKQAFDEADADSSGTLDLEEFKNV
FRYFLGLKGASEHQMTALFMKIDSSSDGEINWNEFCTYMQLEYAEKEESY
FRSKETAFYLPATIVASPHRDTILSITHTSDNNFLCVSQDGYVSFWSSSM
QFKRSKQIESGGRKSKWIIDMILMPQYNKFITATGDREIQFHELSTFEGY
CQINSLETVPLKLAYCLTGSDECILVYGDSEGCVSILIIKNVGETLRLWK
KMPKVEGIASIGIDSVINEENVKYIRWKVHNDWVQEIRYYHSIRSVISCS
TDGNHSLVIGQTLGSTHVSNQKEMKKXRWKVHNDWVQEIRYYHSIRSVIS
CSTDGNHSLVIGQTLGSTHVSNQKDMKKCLQNTSSLKEFGTKRRLPADET
VFKIYKGVKTFDFSKTKNVLATGGMDRLIRLWNPYVPTKPVGILRGHVTP
IIHLFMVEDDNRLFSVSNDIMVKVWDIHDQTCLLTVRPKSHLIKGELSAI
HYNPISRGLAFATDHVALLRLKNKPLAMQMTTTHKEAVTCSCYNTSFNHV
VTSSEGSVIKVWDIENGDQVFEYSDVHDQTSVTDMCFDSTQRRLVTCGQD
GKIKIWNYNNGHCLSTLHPEDELSEVSCLVYFTINKNRYIVAAGWDRRIN
IYSDSSQSLHHVKSPYIKWPDDTPILAHQEDILSIAYLDPHFLATSSYDG
QILVWNVTSGRIFTKPKSDLLNDVTDAELLSGDLSISKIIFLQTRSEKRE
AASLVANGPKGFVHFWNLYDSKLPYAKFENKNGHQVSFMVSNADNSQFIT
TDVKGFVTVWCVEKYCMNGPEKKPPRALRSWRAHIQPITCASLVESKNCM
MTSSTDGTVRVWSLEGHFVGTFGQPLKWNIYDCSSFQHPMAPYDVLMDPG
SIPNHPVLMKDDEDDMDPNEITSSMQELRVRKMNDVDIKQMLDSHVCSNS
SGKRLRHARLRGEMKDETFGEIPLWSDRSAYKSLRCYDLDEVPPPSNDN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000581XLOC_000581Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001003TCONS_00001003Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR002048EF_hand_dom
IPR015943WD40/YVTN_repeat-like_dom
IPR018247EF_Hand_1_Ca_BS
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR011992EF-hand-dom_pair
IPR011044Quino_amine_DH_bsu
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 710..753
e-value: 1.2
score: 16.5
coord: 666..707
e-value: 2.7E-6
score: 36.9
coord: 768..806
e-value: 0.072
score: 22.2
coord: 537..576
e-value: 0.008
score: 25.4
coord: 207..247
e-value: 6.0
score: 12.1
coord: 924..963
e-value: 1.9E-5
score: 34.1
coord: 871..911
e-value: 200.0
score: 2.5
coord: 498..533
e-value: 0.0079
score: 25.4
coord: 251..293
e-value: 130.0
score: 3.6
coord: 622..663
e-value: 0.012
score: 24.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 507..533
e-value: 0.01
score: 16.6
coord: 676..707
e-value: 9.4E-5
score: 23.0
coord: 928..963
e-value: 0.0012
score: 19.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 682..716
score: 10.609
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 544..585
score: 11.277
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 508..533
score: 9.573
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 931..965
score: 10.676
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 775..815
score: 10.809
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 631..672
score: 11.344
IPR002048EF-hand domainSMARTSM00054efh_1coord: 164..192
e-value: 4.0
score: 12.9
coord: 126..154
e-value: 3.7E-4
score: 29.8
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 125..190
e-value: 8.3E-12
score: 45.3
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 122..157
score: 13.704
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 160..195
score: 10.831
IPR002048EF-hand domainCDDcd00051EFhcoord: 126..190
e-value: 2.76361E-8
score: 51.0093
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 392..628
e-value: 2.1E-21
score: 75.8
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 851..1002
e-value: 7.0E-13
score: 47.1
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 629..846
e-value: 1.2E-32
score: 112.6
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 182..391
e-value: 5.8E-9
score: 34.8
NoneNo IPR availableGENE3D1.10.238.10coord: 140..181
e-value: 6.9E-13
score: 48.1
NoneNo IPR availableGENE3D1.10.238.10coord: 76..139
e-value: 3.0E-5
score: 23.2
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 135..147
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 173..185
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 563..577
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 793..807
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 501..972
score: 29.056
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 726..983
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 506..814
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 120..199
IPR011044Quinoprotein amine dehydrogenase, beta chain-likeSUPERFAMILY50969YVTN repeat-like/Quinoprotein amine dehydrogenasecoord: 506..590
coord: 217..296
coord: 381..460

Blast
[Close]
BLAST of TCONS_00001003-protein vs. Swiss-Prot (Human)
Match: WDR49 (WD repeat-containing protein 49 OS=Homo sapiens GN=WDR49 PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 6.903e-64
Identity = 159/575 (27.65%), Postives = 284/575 (49.39%), Query Frame = 0 
Query:  491 TKRRLPADETVFKIYKGVKTFDFSKTKNVLATGGMDRLIRLWNPYVPTKPVGILRGHVTPIIHLFMVEDDNRLFSVSNDIMVKVWDIHDQTCLLTVR---PKSHLIKGELSAIHYNPISRGLAFAT--DHVALLRLKNKPLAMQMTTTHKEAVTCSCYNTSFNHVVTSSEGSVIKVWDIENGDQVFEYSDVHDQTSVTDMCFDSTQRRLVTCGQDGKIKIWNYNNGHCLSTLH-PEDELSEVSCLVYFTINKNRYIVAAGWDRRINIYSDSSQSLHHVKSPYIKWPDDTPILAHQEDILSIAYLDPHFLATSSYDGQILVWN----------------VTSGRIFTKPKSDL---------------LNDVTDAEL-LSGDLSISKIIFLQTRSEKR--EAASLVANGPKGFVHFWNLYDSKLPYAKFENKNGHQVSFMVSNADNSQFITTDVKGFVTVWCVEKYCMNGPEK---KPPRALRSWRAHIQPITCASLVE--SKNCMMTSSTDGTVRVWSLEGHFVGTFGQPLKWNIYDCSSFQHPMAPYDVLMDPGSIPNHPVLMKDDEDDMDPNE 1020
            +K+RL  + T F I +G+  FD+    N++AT G++  + LWNPYV +KPVG+L GH   +I +    +  +LFS S D ++++WDI  Q  +  +    PKS   +      H++  + G  F +  + +ALL +K++  A +   +H++AVTC  YN+    V++S  GS +  W I+ G ++ +++  H    ++ M  D+ + RL+T   DG +KIW++ NG+C  TL+  +D   ++S ++       + I+  GW+R I ++   + +   ++    +W      + H +DIL  A+L P  L T SYDG+I++WN                +   ++ TKP+  L                  V + E+   G  ++ ++ FL+ R        A+LV+ G  G+V FW++Y  +L  A+F   +G     M ++  N    T D+ G++ +W +E+YC+N  +    K P  +RS++ H   I+   + E   +  +++SS D ++ V  +    V  FGQ   W+I +C      +   D  +    I     L   +E  +DP E
Sbjct:    7 SKKRL--NMTSFNIAQGIHAFDYHSRLNLIATAGINNKVCLWNPYVVSKPVGVLWGHSASVIAVQFFVERKQLFSFSKDKVLRLWDIQHQLSIQRIACSFPKSQDFR---CLFHFDE-AHGRLFISFNNQLALLAMKSE--ASKRVKSHEKAVTCVLYNSILKQVISSDTGSTVSFWMIDTGQKIKQFTGCHGNAEISTMALDANETRLLTGSTDGTVKIWDF-NGYCHHTLNVGQDGAVDISQILIL----KKKILVTGWERAITVFRPQNFNQFFIQPE--EWKGG---IQHHDDILCAAFLPPQTLVTGSYDGEIVLWNNSTENAHHVLHPDYQRLLKSKLDTKPQKLLSAGRSQPSHPMADHSTTGVRNFEIDTEGKNAVMRLCFLKARKNTAVTGGANLVSCGGSGYVRFWDIYKKQL-LAEFLAHSGVGSIIMSTDKMNRYLTTGDLDGWLKIWNIEEYCLNSSKNKITKAPTLIRSFQPHEDRISSLEMCEPGGQLLIISSSADCSICVTGVCNAPVWIFGQAKHWHIENCLF----LPKRDTNLVESEIQKEISLFSKEESCLDPTE 558
The following BLAST results are available for this feature:
BLAST of TCONS_00001003-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WDR496.903e-6427.65WD repeat-containing protein 49 OS=Homo sapiens GN... [more]
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