TCONS_00000852-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000852-protein
Unique NameTCONS_00000852-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2237

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000852-protein ID=TCONS_00000852-protein|Name=TCONS_00000852-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2237bp
MSLAEIKEHLRKKEHIDCAELYQNGDNEVNKEQPYFVDRLRLLHEVVDSP
QLCNVQNIECLFKLGADPTEKQINEDTALHMAVQQQKVDIDIIRALVNSQ
HGESAECRMNGKPCICGKKALLVSNNRQKTPRQLDYISDEVLSFLNMEEL
ILAIHNASISLNDKDTTGFKNVHQVLKKIGRTLPDDFSQELLNLLLKLEG
DHHFWVLPMLSYLLTINNLDEIACMAIDKPKWQTYYMAKSLIKIKRCHPL
STVVEKDNFIHTWHQIFKFNEEKKELECLDNDLRYPETKERRDNKEEYLK
FIKNEKVLMYLISVAANNLLEDKTVLYLLITKSLLHDLKEMKEYILNWKH
LGLRNLDLSGQELQCFHDKTTWIALNNNSLKSIPKMPRSNQWKSLTFINL
EGNKLENIGPEIFTLKPLQRINLNNNQIKFLPNIDKFAETLTCLELSKNF
LTNLPKALAKSSITSLYLAENKFESLPLSICEMPLTYLDLSGNKNIIDFP
IDLGRLIRSDSQSSPNLKIDDMNQLCYPQNMIEKPRLLLAYLRSEFLKTS
IRNQEMNLMFVGPFSKWNRILSANLLNEKVTPIDDENKEIEFPSHDGYSL
KYKSIKMSLQSLQYQLKPVIFPGQLDWTQVFLTNRSLYLVVWVKGSPSVL
KEWLNCLVSYAPDSLIMIVKIHRFQTDDSTENIENSINSVVENNDKQSLI
GQLRVEKTKIKREKKRKRDNSNRCQTELITFLDKEFKPSRNLHFGKWKGN
NNSSLNEFWFNYIDMNDAKDIKKLRENIWEVALSLPVNFKNKNEDRILGW
KIPKFYFALDEKIKENAKRKDKRIATISIQDVKDEIQRFDRQQDCNSPAI
LVNCLLDEDICEMLQFLKDTGHLMYFHKVNQKLNEVVILNFKPLQKLLKT
LKDGHRTDPNMKELSREDLKQIMKDVTVDAISNDSHDNDENVLLAVDHVI
SLVENFKIGFNISENQICFHLGMEYYQQSYQGALHLKEKFNRVFTFECLP
FGFWKKLLSRLSLYTNGIVNNDESPYSNYMNPKVTNSSPGEAYRQSFVYY
QEEVVFIKIQILESRENNNSHPWIQRFEDIDRKEKVLVFIRGSERAKTCR
IFTELIHHIETSIGDYPESTLKPFEDVRRWTRCPSCQYNRQGKVFGMEDC
FKQYQENLEEKSFECPPCRKRWLMKDLFPDMVFADVPEILLPSCHVSADV
DWSDAIEGGFGLVCRSTLTPCNRDHSALKVALKKQKDCVPFDDVNPMEIF
FAFRHESVLSYKLADHPYIVTFLGIQRQQRITVTEWADEGSLSDRMKEGQ
SSFSRLLLYRIFFQISDALNFMHSLHISHRDLHAGNIFFFTEDTNIDTNV
KLADFGVSVFANGRVLQEIIGMEKYRPPELFLFDSTYTASAVDIYAVGLN
MYRALTFMKLFNGFLTQNLGLKKLMKRKGDFEKAFQFDQVRQDAICLKRM
MRACIQYHPNDRVNDIKCIVYLLKHPCFQLLMNSIPLTTSPSYEMIMTKR
FDSSTNLVKDQVHFVYAKENRDSNDITIRIRTVAGMDHIRKEGQKNVNDS
REDLLTLIGDFTKEEMEFQSIQYDDLNVIVCIKLKDRFKIVLVPRGEKXV
IVCIKLKDRFKIVLVPRGEKNKLSREYNTTMDDMIEGRFRKMQCLQNQLF
VLYDDCTGEKTKTLITHGSFEPNLPEADNPTSTILSSVSFNIDFPEVKAI
QLYELRANKAIKELDVKDFVADSRFLVLTIKQATQFFILSFYQEGALLLQ
EKYLTEDIGCEIKRMFLHNDKLIFVAAGEGKKVKILIYNISQAEKSDVYQ
IDIDTKKECNFSGLYTGPIDITSFCHANGTYWFGTHTGYIFIVSQIDGQL
YSTPMKPYTSPVTDLILAENNVVLSYGKTLDKDAFTYSYNDSPGFPRESR
VYEVLLEKWFQLNRDFLEARNKEKPVCHDFASDLLLVWDAPNSKDLARYQ
MKRTKGSATNEKLKRVRDHKKECGNKDRLHPENSNVVQGANSIAVQDASS
NAVQGANSNVVQETNSNAVQETNSNAVQETNSNAVQETNSNAVQEANSNA
VQETNSNAVQQVNSDVIQEKNSNEVQGANLTRSPTNRIPNPCTDQSAFTS
ILQQRGLKIYKVKGDGNCFFRAISHQLYDGDDSQYAHIRSKAITYILKNV
DNFTGFLADGENILPYIQRMSQDGAYTDNLIIQATANAFQIAIDVINSNQ
VQYPGTREIPLTEGIPPRKRVVLGHYDQNHFDSTVPI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000514XLOC_000514Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000852TCONS_00000852Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom
IPR000719Prot_kinase_dom
IPR020683Ankyrin_rpt-contain_dom
IPR032675L_dom-like
IPR003323OTU_dom
IPR001611Leu-rich_rpt
IPR011009Kinase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
molecular_function GO:0005524 ATP binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004672 protein kinase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 700..720
NoneNo IPR availableGENE3D3.30.200.20coord: 1205..1298
e-value: 1.7E-5
score: 24.1
NoneNo IPR availableGENE3D1.10.510.10coord: 1299..1554
e-value: 6.8E-31
score: 106.7
NoneNo IPR availableCDDcd00180PKccoord: 1207..1418
e-value: 2.56153E-26
score: 109.282
NoneNo IPR availableSUPERFAMILY54001Cysteine proteinasescoord: 2094..2236
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 1646..2005
e-value: 5.0E-4
score: 18.8
IPR000719Protein kinase domainPFAMPF00069Pkinasecoord: 1221..1477
e-value: 5.2E-29
score: 101.3
IPR000719Protein kinase domainPROSITEPS50011PROTEIN_KINASE_DOMcoord: 1199..1478
score: 25.503
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 3..167
e-value: 7.6E-5
score: 22.0
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 38..98
score: 8.853
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 201..846
e-value: 2.9E-20
score: 71.5
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 344..507
IPR003323OTU domainPFAMPF02338OTUcoord: 2113..2200
e-value: 8.2E-13
score: 48.9
IPR003323OTU domainPROSITEPS50802OTUcoord: 2107..2237
score: 18.577
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 462..483
score: 5.579
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 417..438
score: 7.065
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 484..507
score: 5.81
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 369..390
score: 5.155
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 440..461
score: 5.956
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 394..415
score: 6.726
IPR011009Protein kinase-like domainSUPERFAMILY56112Protein kinase-like (PK-like)coord: 1207..1504

Blast
BLAST of TCONS_00000852-protein vs. Swiss-Prot (Human)
Match: LRRK2 (Leucine-rich repeat serine/threonine-protein kinase 2 OS=Homo sapiens GN=LRRK2 PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 3.730e-31
Identity = 241/1071 (22.50%), Postives = 448/1071 (41.83%), Query Frame = 0
Query:  378 NSLKSIPKMPRSNQWKSLTFINLEGNKLENIGPEIFTLKPLQRINLNNNQIKFLPNIDKFAE-TLTCLELSKNFLTNL---PKALAKSSITSLYLAENKFESLPLSI-CEMPLTYLDLSGNKNIIDFPIDLGRLIRSDSQSSPNLKIDDMNQLCYPQNMIEKPRLLLAYLRSEFLKTSIRNQEMNLMFVGPFSKWNRILSANLLNEKVTPIDDENKEIEFPSHDGYSLKYKSIKM-SLQSLQYQLKPVIFPGQLDWTQV---FLTNRSLYLVVW--VKGSPSV--LKEWLNCLVSYAPDSLIMIVKIHRFQTDDSTENIENSINSVVENNDKQSLIGQLRVEKTKIKREKKRKRDNSNRCQTELITFLDKEFKPSRNLHFGKWKGNNNSSLNEFWFNYIDMNDAKDIKKLRENIWEVALSLPVNFKNKNEDRILGWKIPKFYFALDEKIKENAKRKDKRIATISIQDVKDEIQRFDRQQDCNSPAILVNCLLDE-DICEMLQFLKDTGHLMYFHKVNQKLNEVVILNFKPLQKLLK---TLK-DGHRTDPNMKELSREDLKQIMKDVTVDAISNDSHDNDENVLLAVDHVISLVENFKIGFNISENQICFHLGMEYYQQSYQGALHL-----KEKFNRVFTFECLPFGFWKKLLSRLSLYTNGIVNNDESPYSNYMNPKVTNSSPGEAYRQSFVYYQ---EEVVFIKIQILESRENNNSHPWIQRFEDIDRKEKVLVFIRGSERAKTCRIFTELIHHIETSIGDYPESTLK------PFEDVRRWTRCPSCQYNRQGKVFGMEDCFKQYQE-----NLEEKSFECPPCRKRWLMKDLFPDMVFADVPEILLPSCHVSADVDWSDAIE-----GGFGLVCRSTLTPCNRDHSALKVALKKQKDCVPFDDVNPMEIFFAFRHESVLSYKLADHPYIVTFLGIQRQQRITVTEWADEGSLSDRMKEGQSSFSRLLLYRIFFQISDALNFMHSLHISHRDLHAGNIFFFTEDTNIDTNVKLADFGVSVFANGRVLQEIIGMEKYRPPELFLFDSTYTASAVDIYAVGLNMYRALT 1406
            N L ++P +P      S+T + L  NK   I   I  L  L+ +++++N I++LP    +    L  L  S N ++ L    KA   S +  L+L+ NK + +P  I C   LT LD+S N  +  FP ++G+L +       +L +D+++     +++  K + ++ +L+   LK ++    M LM VG        L   L+  K + +  ++  +      G  +K   I++   +     L    F G+ ++      F+T R+LYL V+   KG   V  +K WL  + + A  S +++V  H   +D+                       Q +   +KI +E   KR                 F   R+ HF                N  + +DA  + KLR+ I   +L    NFK +++  ++G  IP  Y  L++ I   ++RK+  I    + D K  +Q     Q            LDE ++   + FL ++G L++F     +L+++  +  K L K++    T+K +G    P    +SR D+++ +         +      +N +        L+E F+I   I E     +L +      ++  + L      E   R++     P GFW +L++RL          + SPY   ++ +     P   Y +  +Y     E    +  ++L++      HP           E  L     S R K C +  +++ HI++ + ++    L+          +++W            K+  ++D  K+ +E     N ++     P       +  + PD++ AD+P  ++ +   + ++++  A E     G FG V R+        +   +VA+K       F+    + +    R E V+   L  HP +++ L    + R+ V E A +GSL   +++ ++S +R L +RI   ++D L ++HS  I +RDL   N+  FT   N     K+AD+G++ +     ++   G   +R PE+   +  Y   A D+Y+ GL +Y  LT
Sbjct: 1163 NFLAAMPFLP-----PSMTILKLSQNKFSCIPEAILNLPHLRSLDMSSNDIQYLPGPAHWKSLNLRELLFSHNQISILDLSEKAYLWSRVEKLHLSHNKLKEIPPEIGCLENLTSLDVSYNLELRSFPNEMGKLSKI-----WDLPLDELHLNFDFKHIGCKAKDIIRFLQQR-LKKAVPYNRMKLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATV------GIDVKDWPIQIRDKRKRDLVLNVWDFAGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARASSSPVILVGTHLDVSDEK----------------------QRKACMSKITKELLNKRG----------------FPAIRDYHF---------------VNATEESDA--LAKLRKTIINESL----NFKIRDQ-LVVGQLIPDCYVELEKIIL--SERKNVPIE-FPVIDRKRLLQLVRENQ----------LQLDENELPHAVHFLNESGVLLHFQDPALQLSDLYFVEPKWLCKIMAQILTVKVEGCPKHPK-GIISRRDVEKFL---------SKKRKFPKNYM---SQYFKLLEKFQIALPIGEE----YLLVPSSLSDHRPVIELPHCENSEIIIRLYEMPYFPMGFWSRLINRLL---------EISPY--MLSGRERALRPNRMYWRQGIYLNWSPEAYCLVGSEVLDN------HP-----------ESFLKITVPSCR-KGCILLGQVVDHIDSLMEEWFPGLLEIDICGEGETLLKKWALYSFNDGEEHQKIL-LDDLMKKAEEGDLLVNPDQPRLTIP-------ISQIAPDLILADLPRNIMLN---NDELEFEQAPEFLLGDGSFGSVYRAA-------YEGEEVAVKI------FNKHTSLRLL---RQELVVLCHL-HHPSLISLLAAGIRPRMLVMELASKGSLDRLLQQDKASLTRTLQHRIALHVADGLRYLHSAMIIYRDLKPHNVLLFTLYPNAAIIAKIADYGIAQYCCRMGIKTSEGTPGFRAPEVARGNVIYNQQA-DVYSFGLLLYDILT 2068          
The following BLAST results are available for this feature:
BLAST of TCONS_00000852-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LRRK23.730e-3122.50Leucine-rich repeat serine/threonine-protein kinas... [more]
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