TCONS_00000851-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000851-protein
Unique NameTCONS_00000851-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length709

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000851-protein ID=TCONS_00000851-protein|Name=TCONS_00000851-protein|organism=Clytia hemisphaerica|type=polypeptide|length=709bp
MDGQKLKDLLQCAYCLERLDEKSKVLPCQHTFCTKCLNIIVENKGHLHCP
ECKSDFRNTNIDELPKNMLLLRILETLKNTNNKLRGCSDKLTEGQDEIPS
VPKHENPKPKDAVKRISAKSKYQAQINQPCARGLHNFISNEEGDLPFKKG
DVISLAHEIDTNWYEGFLGNKRGSIPKNFLETLVPLPKIEDTKVENPFAK
ALYSYENKEEPELISFREGDIIGVIKKVDNNWFGGILGGQYGIFPVNFVQ
LNKAAKEIMSGDQSSSATSSSDEENESSRKKTSRGRRVSRQKAASTSEPN
AQSSCVRRDRGASTSNDPVTKRHTIHVENPDEQLRQSRRALNLSEDFEPQ
ERTRAMSQGRRVNYECQQSVPRTLASTVLLSRALRRSDERLGINTSSGLT
PTVSMTTSIPRATEGITRSLSTSPSNSIPNAIGTGEMHTALFTYSPARDD
ELALIQGDQYSVIEKHLDGWFKGVHVRSQQCGVFPGNYVKPSSQVSQQML
RSIGTHPSRAVIGYGSNPSSPNVPASSGPAFNFPPTRMDVGEDSSSNSNG
ATSSSISAYGENSSPKTSGMSGFMKIFKKNKTKRQTLPAPTTPQQPPSYY
HSSMPGPIARPSPNVPAEPPPPYTPSPLIPQTALSTRTNDSVINTSVPST
SIEKFRAIATYPALHENELSLRVGDLIFVTKKHIDGWYTGKSQRTGTTGV
FPSTFVIPN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000513XLOC_000513Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000851TCONS_00000851Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR001841Znf_RING
IPR018957Znf_C3HC4_RING-type
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0046872metal ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001452SH3 domainPRINTSPR00452SH3DOMAINcoord: 197..207
score: 35.73
coord: 480..492
score: 44.72
coord: 212..227
score: 30.4
IPR001452SH3 domainSMARTSM00326SH3_2coord: 653..709
e-value: 2.7E-13
score: 60.2
coord: 197..253
e-value: 5.1E-16
score: 69.2
coord: 436..493
e-value: 7.7E-14
score: 62.0
coord: 129..184
e-value: 1.1E-11
score: 54.9
IPR001452SH3 domainPFAMPF00018SH3_1coord: 656..703
e-value: 8.1E-11
score: 41.3
coord: 134..176
e-value: 2.1E-6
score: 27.1
IPR001452SH3 domainPFAMPF14604SH3_9coord: 440..490
e-value: 1.2E-9
score: 37.8
coord: 201..250
e-value: 7.9E-11
score: 41.6
IPR001452SH3 domainPROSITEPS50002SH3coord: 433..494
score: 13.957
IPR001452SH3 domainPROSITEPS50002SH3coord: 650..709
score: 13.908
IPR001452SH3 domainPROSITEPS50002SH3coord: 126..185
score: 11.91
IPR001452SH3 domainPROSITEPS50002SH3coord: 194..254
score: 14.596
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 611..616
coord: 652..707
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 432..506
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 125..187
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 196..253
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 12..52
e-value: 5.1E-6
score: 36.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 12..53
score: 12.135
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 11..56
e-value: 1.09586E-10
score: 57.0704
NoneNo IPR availableGENE3D2.30.30.40coord: 653..708
e-value: 7.6E-15
score: 53.7
NoneNo IPR availableGENE3D2.30.30.40coord: 462..652
e-value: 3.3E-9
score: 35.7
coord: 224..437
e-value: 3.1E-13
score: 48.6
coord: 155..198
e-value: 2.6E-12
score: 45.7
NoneNo IPR availableGENE3D2.30.30.40coord: 438..461
e-value: 3.5E-5
score: 22.7
coord: 124..154
e-value: 1.1E-8
score: 34.0
coord: 199..223
e-value: 3.1E-9
score: 35.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 510..621
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..363
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 6..75
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 12..52
e-value: 2.7E-7
score: 30.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..123
e-value: 6.9E-14
score: 51.1
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 28..37

Blast
[Close]
BLAST of TCONS_00000851-protein vs. Swiss-Prot (Human)
Match: SH3R3 (SH3 domain-containing RING finger protein 3 OS=Homo sapiens GN=SH3RF3 PE=1 SV=2)

HSP 1 Score: 244.588 bits (623), Expect = 1.028e-69
Identity = 170/537 (31.66%), Postives = 256/537 (47.67%), Query Frame = 0 
Query:    1 MDGQKLKDLLQCAYCLERLDEKSKVLPCQHTFCTKCLNIIVENKGHLHCPECKSDFRNTNIDELPKNMLLLRILETLKNTNNKLRGCS------DKLTEGQDEIPSVPKHENPK----PKDAV------------KRISAKSKYQAQINQPC----ARGLHNFISNEEGDLPFKKGDVISLAHEIDTNWYEGFLGNKRGSIPKNFLETLVPLPKIEDTKVENPFAKALYSYENK---EEPELISFREGDIIGVIKKVDNNWFGGILGGQYGIFPVNFVQLNKAAKEIMSGDQSSSATSSSDEENESSRKKTSRGRRVSRQKAASTSEPNAQSSCVRRDRGASTSNDPVTKRHTIHVENPDEQLRQSRRALNLSEDFEPQERTRAMSQGRRVNYECQQSVPRTLASTVLLSRALRRSDERLG-------------INTSSGLTPTVSMTTSIPRATEGITRSLSTSPSNSIPNAIGTGEMHTALFTYSPARDDELALIQGDQYSVIEKHLDGWFKGVHVRSQQCGVFPGNYVKPSSQV 495
            MD   L DLL+C+ CLERLD  +KVLPCQHTFC +CL  IV ++  L CPEC+       +DELP N+LL+R+L+ ++       G S       +   GQ   P++           P   V             R  A S+       PC     + L+++   E GDL F KGD+I L  ++D  WY G L   +G +P ++++ + PLP         P  KALY +E K   ++ + ++F + +I+ V+++VD NW  G+LG + GIFP+ +V+LN +AK+++  D+   A +SS   +  S      G   S   + + S   A S+  RR  G   +     KRH+                      F     T   SQ     +  + S P      VL+S +  R+  R+G             +++S+G TP     T++PRA   ++    T P   +P  +     + AL+ Y P + DEL L +G+ Y V+EK  DGWFKG  +R+   GVFPGNYV P S+V
Sbjct:   46 MDESSLLDLLECSVCLERLDTTAKVLPCQHTFCRRCLESIVCSRHELRCPECRI-LVGCGVDELPANILLVRLLDGIRQRPRA--GTSPGGSPPARPIPGQSAAPTLAGGGGGAAGSTPGSPVFLSAAAGSTAGSLRELATSRTAPAAKNPCLLPYGKALYSYEGKEPGDLKFNKGDIIVLRRKVDEQWYHGELHGTQGFLPASYIQCIQPLPHAP------PQGKALYDFEMKDKDQDKDCLTFTKDEILTVLRRVDENWAEGMLGDKIGIFPLLYVELNDSAKQLIEMDKPCPAAASSCNASLPS----DSGAVASVAPSPTLSSSGAVSAFQRRVDGKKNTK----KRHS----------------------FTALSVTHRSSQAASHRHSMEISAP------VLISSSDPRAAARIGDLAHLSCAAPTQDVSSSAGSTP-----TAVPRAAS-VSGEQGTPPKVQLPLNV-----YLALYAYKPQKSDELELHKGEMYRVLEKCQDGWFKGASLRTGVSGVFPGNYVTPVSRV 526
The following BLAST results are available for this feature:
BLAST of TCONS_00000851-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SH3R31.028e-6931.66SH3 domain-containing RING finger protein 3 OS=Hom... [more]
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