TCONS_00000846-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000846-protein
Unique NameTCONS_00000846-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length860

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000846-protein ID=TCONS_00000846-protein|Name=TCONS_00000846-protein|organism=Clytia hemisphaerica|type=polypeptide|length=860bp
MRLSILVLFLVVFVVVYSKPNGSHKVEEVEKEDHLLERRGKKEKVKADKK
KEKEKAEKEKEKAQKEKEKQKEKAEKEKEKEKEKAEKEKEKAEKEKEKEA
EKLRKKLEKERKKAEKKEKWHKVEEMLANNEDLVVDDDDLEKHYPKKLKE
KKKKGKKVKKSEHDTFENNYGRYKNRTGISVMENLNAINNAHDQQLDEVD
MVDLRPPQSKRDAMRDQMYLWIDRVVPYVIDPALKDGTDTIVDAMNEIQS
ASCIQFVPYTGQSNWIKFVSSSGCWSSVGRKFWVSGYQELSLGSGCLFKG
IIIHELLHSLGFYHEQSRYDRDENVEIFWENIPETNQHNFDRQKELRVSG
LGTQYDAQSIMHYGKFAFAKDPSKPTIVKLSNPETSIGQRDHLSDTDKEQ
LNLLYSCTSKDKQGWSNWSEYGPCTKEGRRERSRFCMHPTDKTSCPNPTN
TMYLHYGVDTEVQTGCAYYQDGHWGRWSSWGSCSVTCAIGTKSRTRKCDD
PAPSTNGAPCKGLSVQSASCEMISCDAGPYDCTFEAETTPTCKWTKDLNA
DFQWRRHTGSTPSSSTGPSGDHTSGTGYYMYIESSSPAMVGYKARLVSPQ
IKAGVHCLAFWYNMYGFSTGSLNVYLEGSQEQLFTLSGDQLKDWHLKRLK
IDSAGEFKIVIEAVRGSSFQGDIAIDDIKVKDGPCFAPPTPLPTTTEETT
TTDPPTTTTEPPTTTEPPTTATSTTTPLPTTTTTELTTTPEPHIPEAVPV
GCYKDFGYIDSKRPFSKYKDLSSIVIWSADVEFAKNNFKDVVGNCSAYAR
ANGYQHFAIQYYYECWTGSNEDINYGRDGESVGCWPQVDQNAGPFLIGQD
YSNMVYRWED
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000508XLOC_000508Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000846TCONS_00000846Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001506Peptidase_M12A
IPR006026Peptidase_Metallo
IPR000998MAM_dom
IPR000884TSP1_rpt
IPR024079MetalloPept_cat_dom
IPR034035Astacin-like_dom
IPR013320ConA-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0016020 membrane
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 39..124
NoneNo IPR availablePRINTSPR01705TSP1REPEATcoord: 472..485
score: 48.79
coord: 490..501
score: 42.56
coord: 509..520
score: 32.37
NoneNo IPR availableGENE3D2.60.120.200coord: 526..685
e-value: 2.6E-50
score: 170.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 686..744
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..102
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 216..407
IPR001506Peptidase M12APRINTSPR00480ASTACINcoord: 241..259
score: 29.65
coord: 393..406
score: 39.88
coord: 315..332
score: 51.67
coord: 354..369
score: 49.48
coord: 296..314
score: 54.04
IPR001506Peptidase M12APFAMPF01400Astacincoord: 220..408
e-value: 6.2E-58
score: 195.5
IPR006026Peptidase, metallopeptidaseSMARTSM00235col_5coord: 217..359
e-value: 8.8E-34
score: 128.2
IPR000998MAM domainSMARTSM00137MAM_2coord: 527..687
e-value: 5.5E-51
score: 185.4
IPR000998MAM domainPFAMPF00629MAMcoord: 532..686
e-value: 1.3E-42
score: 145.3
IPR000998MAM domainPROSITEPS50060MAM_2coord: 530..687
score: 36.537
IPR000998MAM domainCDDcd06263MAMcoord: 532..685
e-value: 1.54172E-45
score: 160.236
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 415..467
e-value: 4.4
score: 3.6
coord: 474..526
e-value: 1.8E-12
score: 57.5
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 470..525
e-value: 5.8E-14
score: 51.6
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 409..454
e-value: 6.0E-4
score: 19.7
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 416..449
e-value: 0.0098
score: 16.0
coord: 476..525
e-value: 4.2E-9
score: 36.4
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 471..526
score: 12.996
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 469..525
IPR024079Metallopeptidase, catalytic domainGENE3D3.40.390.10coord: 212..408
e-value: 2.0E-55
score: 187.3
IPR034035Astacin-like metallopeptidase domainCDDcd04280ZnMc_astacin_likecoord: 223..405
e-value: 4.55421E-74
score: 240.551
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 529..685

Blast
BLAST of TCONS_00000846-protein vs. Swiss-Prot (Human)
Match: MEP1A (Meprin A subunit alpha OS=Homo sapiens GN=MEP1A PE=1 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 1.175e-40
Identity = 91/229 (39.74%), Postives = 132/229 (57.64%), Query Frame = 0
Query:  183 ENLNAINNAHDQQLDEVDMVDLRPPQSKRDAMRDQMYLWIDRVVPYVIDPALK-DGTDTIVDAMNEIQSASCIQFVPYTGQSNWIKFVSSSGCWSSVGRKFWVSGYQELSLGSGCLFKGIIIHELLHSLGFYHEQSRYDRDENVEIFWENIPETNQHNFDRQKELRVSGLGTQYDAQSIMHYGKFAFAKDPSKPTI-VKLSNPETSIGQRDHLSDTDKEQLNLLYSCTS 409
            ++++ IN A    L + D++     Q  R+ +RD    W    +PY++   L  +    I+ A    +  SC+ F PY G+S++I F    GCWS VG +      Q +S+G GC +K II HE+LH+LGFYHEQSR DRD+ V I+W+ I    QHNFD   +  ++ L T YD +S+MHY  F+F K+ S PTI  K+    + IGQR   S  D E+LN +Y+CT+
Sbjct:   41 KDISEINLAAGLDLFQGDIL----LQKSRNGLRDPNTRWT-FPIPYILADNLGLNAKGAILYAFEMFRLKSCVDFKPYEGESSYIIFQQFDGCWSEVGDQ---HVGQNISIGQGCAYKAIIEHEILHALGFYHEQSRTDRDDYVNIWWDQILSGYQHNFDTYDDSLITDLNTPYDYESLMHYQPFSFNKNASVPTITAKIPEFNSIIGQRLDFSAIDLERLNRMYNCTT 261          
The following BLAST results are available for this feature:
BLAST of TCONS_00000846-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEP1A1.175e-4039.74Meprin A subunit alpha OS=Homo sapiens GN=MEP1A PE... [more]
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