TCONS_00000831-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000831-protein
Unique NameTCONS_00000831-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length568

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000831-protein ID=TCONS_00000831-protein|Name=TCONS_00000831-protein|organism=Clytia hemisphaerica|type=polypeptide|length=568bp
MDAFGTSSGVPHIVVEKIIDFKVDNESSEPSYRIKWEDTWVPENVMQCMF
PDLLQEYKNKILQKDIIMDAPEQVQSLPGEEVQVAMQDSMDSFANENNSI
IFNTENSRLLNALDLIVLQTQIVEKIPDSLEILDLNSTDLELCQLIKWRG
SLSSTDLPQSLNTRSKRTRKPSMKMSECDFKKRRVGSKRSKTCTANKTNK
KNSQEVDCPICGRVIRSKRLDSHMLLHSKDSKFSCETCGKVCGTRSDLRN
HMLIHGEYNYECPYCDQKFKQPAPYRVHMKMHTVENNWMCDVCFETFKFQ
GELKQHCMSKHKDISKDPQRCCVCKELLKSPISVYKHSVGHSGIRNFVCG
ICSKRFKHKSHLEKHLNMHERMEKEKTEPPMGGPFNCQICGREFLQLQSM
KIHLGKHKANQETNLEEYLQKKAQRLAASKEKNRQNARIYKAKYKEKKAT
KMRILQDLGIEPDNPIAKTVDLTGIIDNEGGTAELKIVEEAADQPEGEQA
VISVNKQVEPITVGKNVVLGSALNETLEYVVATDSTSVVVGDDVAGISVE
NMAPGFALLSFLKQSKTD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000499XLOC_000499Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000831TCONS_00000831Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR023780Chromo_domain
IPR013083Znf_RING/FYVE/PHD
IPR016197Chromodomain-like
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 260..282
e-value: 3.4E-4
score: 29.9
coord: 233..255
e-value: 3.3E-4
score: 30.0
coord: 288..311
e-value: 1.1
score: 18.3
coord: 206..227
e-value: 8.0
score: 14.1
coord: 385..407
e-value: 0.067
score: 22.3
coord: 319..341
e-value: 44.0
score: 7.6
coord: 347..369
e-value: 0.0068
score: 25.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 262..282
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 290..311
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 349..369
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 387..407
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 385..412
score: 10.201
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 347..374
score: 11.489
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 260..287
score: 11.344
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 233..255
score: 10.138
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 255..306
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 217..269
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 333..370
NoneNo IPR availableGENE3D3.30.160.60coord: 378..395
e-value: 0.0034
score: 17.2
NoneNo IPR availableGENE3D3.30.160.60coord: 203..240
e-value: 9.6E-10
score: 38.0
coord: 317..356
e-value: 6.1E-8
score: 32.2
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 260..282
e-value: 6.8E-5
score: 23.0
coord: 347..369
e-value: 2.5E-5
score: 24.4
coord: 233..255
e-value: 2.4E-4
score: 21.3
NoneNo IPR availableGENE3D2.30.30.380coord: 251..266
e-value: 8.2E-5
score: 22.2
coord: 286..316
e-value: 2.0E-4
score: 20.9
NoneNo IPR availableGENE3D2.20.28.10coord: 357..377
e-value: 5.7E-4
score: 19.3
NoneNo IPR availableGENE3D3.30.160.60coord: 396..450
e-value: 0.0021
score: 17.9
NoneNo IPR availableGENE3D3.30.160.60coord: 241..250
e-value: 0.003
score: 17.2
NoneNo IPR availableGENE3D2.40.50.40coord: 6..97
e-value: 1.7E-5
score: 24.0
NoneNo IPR availableCDDcd00024CHROMOcoord: 14..60
e-value: 1.89475E-7
score: 47.2587
IPR023780Chromo domainPFAMPF00385Chromocoord: 14..60
e-value: 4.7E-6
score: 26.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 267..285
e-value: 2.0E-8
score: 33.6
IPR016197Chromo domain-likeSUPERFAMILY54160Chromo domain-likecoord: 13..64

Blast
[Close]
BLAST of TCONS_00000831-protein vs. Swiss-Prot (Human)
Match: ZF69B (Zinc finger protein ZFP69B OS=Homo sapiens GN=ZFP69B PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 1.046e-23
Identity = 63/207 (30.43%), Postives = 100/207 (48.31%), Query Frame = 0 
Query:  206 VDCPICGRVIRSK-RLDSHMLLHSKDSKFSCETCGKVCGTRSDLRNHMLIH-GEYNYECPYCDQKFKQPAPYRVHMKMHTVENNWMCDVCFETFKFQGELKQHCMSKHKDISKDPQRCCVCKELLKSPISVYKHSVGHSGIRNFVCGICSKRFKHKSHLEKHLNMH--ERMEKEKTEPPMGGPFNCQICGREFLQLQSMKIHLGKHK 408
             +C IC ++ +    L  HM +H+ +  F C+ CGK     S L  H  IH GE  YEC  C + F+ P+    H+++HT E  + C VC + F     L QH  +    + + P  C  C +       + +H + H+G++ ++C +CSK F H ++L +H   H  ER            P+ C+ CG+ F    S +IHL  H+
Sbjct:  279 FECNICEKIFKQLIHLTEHMRIHTGEKPFRCKECGKAFSQSSSLIPHQRIHTGEKPYECKECGKTFRHPSSLTQHVRIHTGEKPYECRVCEKAFSQSIGLIQHLRT---HVREKPFTCKDCGKAFFQIRHLRQHEIIHTGVKPYICNVCSKTFSHSTYLTQHQRTHTGER------------PYKCKECGKAF----SQRIHLSIHQ 466

HSP 2 Score: 84.7297 bits (208), Expect = 2.623e-17
Identity = 65/238 (27.31%), Postives = 98/238 (41.18%), Query Frame = 0 
Query:  208 CPICGRVI-RSKRLDSHMLLHSKDSKFSCETCGKVCGTRSDLRNHMLIH-GEYNYECPYCDQKFKQP-------------APY---------------RVHMKMHTVENNWMCDVCFETFKFQGELKQHCMSKHKDISKDPQRCCVCKELLKSPISVYKHSVGHSGIRNFVCGICSKRFKHKSHLEKHLNMHERMEKEKTEPPMGGPFNCQICGREFLQLQSMKIHLGKHKANQETNL 415
            C  CG+   +S  L  H  +H+ +  + C+ CGK     S L  H+ IH GE  YEC  C++ F Q               P+               R H  +HT    ++C+VC +TF     L QH   +     + P +C  C +     I +  H   H+G++ + C  C K F+H S   KH  +H     EK       P++C  CG+ F    S+  H   H  N  +N+
Sbjct:  309 CKECGKAFSQSSSLIPHQRIHTGEKPYECKECGKTFRHPSSLTQHVRIHTGEKPYECRVCEKAFSQSIGLIQHLRTHVREKPFTCKDCGKAFFQIRHLRQHEIIHTGVKPYICNVCSKTFSHSTYLTQH---QRTHTGERPYKCKECGKAFSQRIHLSIHQRVHTGVKPYECSHCGKAFRHDSSFAKHQRIH---TGEK-------PYDCNECGKAFSCSSSLIRHCKTHLRNTFSNV 533
The following BLAST results are available for this feature:
BLAST of TCONS_00000831-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZF69B1.046e-2330.43Zinc finger protein ZFP69B OS=Homo sapiens GN=ZFP6... [more]
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