TCONS_00000828-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000828-protein
Unique NameTCONS_00000828-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1556

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000828-protein ID=TCONS_00000828-protein|Name=TCONS_00000828-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1556bp
MSGSKELELVERVFFRLVLAESDDKFQSELNGFLPPVLLKIATTDEKVKN
KVLELLTHVNKRLKSRPTIELPLGTLLVQYTDAGVPSSVKNFTFIYIKMG
YQRCSLEEKLKLMPKMFKSIIGKNPAHQSKLLGSILFDMNSLVYPENQAE
KKKLFPFLEDQATRVFVLEYFLDFLLLPYDMNLDMKDQTVLPPPSFSRAS
FQRTQTDPIMNRDQIETAKLAILKFLSSELIDAEDVIPHFIISSSDTKHT
VAGKGENGIKTYSSANTWENKKLLNKILLLYQGTVHKPGNMATYVAADNV
RLPSSPRLKMKIFPFLLKSRIIADVNPALCLQIIFEGQFGDKTNQKLKQY
CLEFIHHISLTASSKTLSFLAPLFNQALSRVSFNRNEDAKLRILALNGFS
KIAKSAPEVIKRDVTIVEKLFSLLIEESSEIQSAVLSIISSITKTFETAQ
RKDQNVLESLLLRYCTSESSQVRIGACRLAQSAFSSVHLPSRFALIILSV
DSQEQLKEESSRALFPTSGTYPVYEDVCYYMFDQFSTSTQNSLAIRQVLL
FLKKCLYQSCDIKEDDLEDTISTKITAYLNQKVQSIENDNLGKSFIGKHI
TLLKNALVYSLDYTTYTLALENLFLLFTSNESLTLLFQVEDQTIISKLFS
SPNDDVRRLAAQVLSILFARHRPLQSGPIQNLLDELSSPNQHELYKDGKI
YCIGYTLPRYFELLQCGHAEINLDLNSLVALTKEILQVLCTIVKQKNQQN
FIMASCCTSLYNICRYVELPVSDASTKAVYADEMVTLLSELFKSTNHVKT
KETFALALTSLCVGDTDFVLKEKVVELLFKSAKIKEVELQFAIGECISCI
GAGQSSKVFKRYYHHEMTLKVPEDEVMLGLLKRIISEVVHSPLALARQAG
VIWLLSLVQYTSDHPVVSQEIKQIQKAFMTCLCDADEVTQDVASRGLSLI
YESTSDENKQEMMEYLTDSLMQGNRPKQQKIDADTKLFEEGALGSSPDGS
KLSTYKELCSLATSMNKPDLIYKFMSLANHNAVWNSKKGAAFGIKAIAEI
AGEEIKPLIGLIIPKLYRYQYDPNSSLKRSMTSIWSVLVKDEKNMIATHW
RSILEDLMSNITHNLWRTREACCSALKDLLKEIPDNEIVPHLVDIWNIAF
KLMDDVKETVRKAATALVIALSNLSVRFCETQNSEVGEQALEKILDVLLN
VGITSRVDEVKAISLKTLVKITKTGGKLLDKYVTTIIPTMLEALSGLEPQ
AFNTLRMQLSNDGDVQEKLDVLRVSSTNSSPMMEAINLSLMNVNETNLGD
LAPKLCLLLKSGMGIATKVGTATVISSLVLLCQEHMKPYAGKFLSSLLNG
VKNSNASVIKKAYSSCIGAVMKHAQESTVEKVIAKIKGWFFESEDNKNEE
ACSLCIGAMIKSSSELFTSYGSLLVPLVLVAMQQEESSKGDVKKPWTEIW
AELPSGTKASMKLYLSEIYELAKECYQSKLWVIRKNATKAINMVVLSIGG
TMQASHVINFLKLTLENLSGRTWDGKETLLDTTMNLCVKCKESIKSQDDL
IIMEKV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000497XLOC_000497Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000828TCONS_00000828Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024372Ecm29
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0032947protein complex scaffold
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0043248proteasome assembly
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043248 proteasome assembly
molecular_function GO:0005488 binding
molecular_function GO:0032947 protein complex scaffold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024372Proteasome component Ecm29PFAMPF13001Ecm29coord: 10..497
e-value: 3.9E-106
score: 355.6
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 7..693
e-value: 4.7E-21
score: 74.5
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1280..1552
e-value: 4.0E-19
score: 67.2
coord: 865..1279
e-value: 4.9E-36
score: 123.3
NoneNo IPR availableGENE3D1.25.40.150coord: 718..816
e-value: 0.024
score: 14.3
NoneNo IPR availableCDDcd00020ARMcoord: 1103..1218
e-value: 0.00495844
score: 36.1384
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1264..1549
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 230..563
coord: 13..121
coord: 591..686
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1048..1309
coord: 645..693
coord: 734..969

Blast
BLAST of TCONS_00000828-protein vs. Swiss-Prot (Human)
Match: ECM29 (Proteasome-associated protein ECM29 homolog OS=Homo sapiens GN=ECM29 PE=1 SV=2)

HSP 1 Score: 904.82 bits (2337), Expect = 0.000e+0
Identity = 537/1606 (33.44%), Postives = 893/1606 (55.60%), Query Frame = 0
Query:    6 ELELVERVFFRLVLAESDDKFQSELNGFLPPVLLKIATTDEKVKNKVLELLTHVNKRLKSRPTIELPLGTLLVQYTDAGVPSSVKNFTFIYIKMGYQRCSLEEKLKLMPKMFKSIIGKNPAHQSKLLGSILFDMNSLVYPENQAEKKKLFPFLEDQATRVFVLEYFLDFLLLPYDMNLDMKDQTVL-------------------PPPSFSRASFQRTQTDPIMNRDQIETAKLAILKFLSSELIDAEDVIPHFIISSSDTKHTVAGKGENGIKTYSSANTWENKKLLNKILLLYQGTVHKPGNMATYVAADNVRLPSSPRLKMKIFPFLLKSRIIADVNPALCLQIIFEGQFGDKTNQKLKQYCLEFIHHISLTASSKTLSFLAPLFNQALSRVSFNRNEDAKLRILALNGFSKIAKSAPEVIKRDVTIVEKLFSLLIEESSEIQSAVLSIISSITKTFETAQRKDQNVLESLLLRYCTSESSQVRIGACRLAQSAFSSVHLPSRFALIILSVDSQEQLKEESSRAL--FP-------TSGTYPVYEDVCYYMFDQFSTSTQ--------------NSLAIRQVLLFLKKCLYQSCDIKED-----DLEDTISTKITAYL------NQKVQSIENDNLGKSFIGKHITLLKNALVYSLDYTTYTLALENLFLLFTSNESLTLLFQVEDQTIISKLFSSPNDDVRRLAAQVLSILFARHRPLQSGPIQNLLDEL---SSPNQHELYKDGKIYCIGYTLPRYF---ELLQCGHAEINLDLNSLVALTKEILQVLCTIVKQKNQQNFIMA-SCCTSLYNICRYVELPVSDASTKAVYADEMVTLLSELFKSTNHVKTKETFALALTSLCVGDTDFVLKEKVVELLFKSAKIKEVELQFAIGECISCIGAGQSSKVFKRYYHHEMTLKVPE-----DEVMLGLLKRIISEVVHSPLALARQAGVIWLLSLVQYTSDHPVVSQEIKQIQKAFMTCLCDADEVTQDVASRGLSLIYESTSDENKQEMMEYLTDSLMQGNRPKQQKIDADTKLFEEGALGSSPDGSKLSTYKELCSLATSMNKPDLIYKFMSLANHNAVWNSKKGAAFGIKAIAEIAGEEIKPLIGLIIPKLYRYQYDPNSSLKRSMTSIWSVLVKDEKNMIATHWRSILEDLMSNITHNLWRTREACCSALKDLLKEIPDNEIVPHLVDIWNIAFKLMDDVKETVRKAATALVIALSNLSVRFCETQNSEVGEQALEKILDVLLNVGITSRVDEVKAISLKTLVKITKTGGKLLDKYVTTIIPTMLEALSGLEPQAFNTLRMQLSNDGDVQEK--LDVLRVSSTNSSPMMEAINLSLMNVNETNLGDLAPKLCLLLKSGMGIATKVGTATVISSLVLLCQEHMKPYAGKFLSSLLNGVKNSNASVIKKAYSSCIGAVMKHAQESTVEKVIAKIKGWFFESEDNKNEEACSLCIGAMIKSSSELFTSYGSLLVPLVLVAMQQ---EESSKGDVKKPWTEIWAELPSGTKASMKLYLSEIYELAKECYQSKLWVIRKNATKAINMVVLS-IGGTMQASHVINFLKLTLENLSGRTWDGKETLLDTTMNLCVKC 1540
            EL  +ERVF RL  AE+D++ Q+ ++ FLPPVLLK+++T E V+ KV+ELL H+NKR+KSRP I+LP+ TLLVQY D    S V NFT IY+KMGY R  +E++ +L P +  ++ GK    Q  L+  ++  +  + YP   ++    F   E   T   +L++ LD LL+PY   L+                          PPP  S  + +R   D     +Q+E  KL I+KF+ +E +   + + H +I+SSDT+H+VA   +  +K+  S   W N  ++NK+  +Y G +         +  +  R P S R+K+KI P LL+SR  A+  PA  +Q++++G FG  TN KL+   L+F+HHI +T     +  L P+    L+++     ED KL  +A +   K++   P +  +D+ +V++LF  L +E  E + A+   +S +   + T +   + ++E+L+  Y      QVR  A + A + F S H+PSR+ L++ + D +E++  E+ R L   P       TS   P + ++ YY+ ++ S   +              N  A  +++L+L+ CL  S  +        D++D  +  I  Y+       Q   S  N +   + +  +I LL+  L            LE + +     E L   F V+    I  L ++  +++R LAA   S++ +    +    +++++++L   +  N     + G +  +G+T+ RY    ++      ++  + ++L    + I     TI    +  + ++A + CT+L  I R   LP+    +       + +LLS +  S    K KE     L    VGD DF  ++ +++ L  S + K++ELQF IGE I+    G SS   +  +        P      ++V+  +L  I+++ + SP    RQA  IWLLSLV+  S H  V   +K+IQ AF++ L + DE++QDVAS+GL L+YE  +++++QE++  L ++LM G R K + +  +T +F+ GALG +PDG  LSTYKELCSLA+ +++PDL+YKFM+LANH+A+WNS+KGAAFG   IA  AGE++ P +  ++P+LYRYQ+DPN  ++++MTSIW+ LV D K+M+  + + IL+DL+ N+T N+WR RE+ C AL DLL+  P ++I+  L +IW   F++ DD+KE+VRKAA   +  LS + V+ C+      G++ +  +L  LL+ G+ S V EV+A+S+ TLVKI+K+ G +L  +   +IP +LE+LS LEPQ  N L ++ +     QEK  +D  R+S+  SSPMME IN+ L  ++ + LG+L P+LC L++SG+G+ TK G A+VI SL   C + + PY+GK +S+LL+G+ + N SVI+K+ +  +G +++ +++S+ EK++ K+ GW+ E E+   + +C+L I A+ + S ++  ++   ++PL  + M +   EE S+ +    WTE+W E   G+   ++LYL E+  + ++  QS+ W ++  A  AI M  ++    ++   ++   L   L+ L+GRTW GKE LL     +   C
Sbjct:   12 ELNQLERVFLRLGHAETDEQLQNIISKFLPPVLLKLSSTQEGVRKKVMELLVHLNKRIKSRPKIQLPVETLLVQYQDPAAVSFVTNFTIIYVKMGYPRLPVEKQCELAPTLLTAMEGKPQPQQDSLMHLLIPTLFHMKYPVESSKSASPFNLAEKPKTVQLLLDFMLDVLLMPYGYVLNESQSRQNSSSAQGSSSNSGGGSGIPQPPPGMSFYAAKRVIGDNPWTPEQLEQCKLGIVKFIEAEQVPELEAVLHLVIASSDTRHSVATAADLELKSKQSLIDWNNPAIINKMYKVYLGDIPLKTKEGAVLKPELKRDPVSTRVKLKIVPHLLRSRQAAETFPA-NIQVVYDGLFGTNTNSKLRTLSLQFVHHICITCPEIKIKPLGPMLLNGLTKLINEYKEDPKLLSMAYSAVGKLSSRMPHLFTKDIALVQQLFEALCKEEPETRLAIQEALSMMVGAYSTLEGAQRTLMEALVASYLIKPEVQVRQVAVKFASTVFPSDHIPSRYLLLLAAGDPREEVHGEAQRVLRCLPGRNRKESTSEQMPSFPEMVYYIQEKASHRMKTPVKYMTGTTVLPFNPAAFGEIVLYLRMCLAHSAGVVPTSQSLADMQDH-APAIGRYIRTLMSSGQMAPSSSNKSGETNPVQIYIGLLQQLLAGVGGLPVMYCLLEAVSVY---PEKLATKF-VDKTEWIKSLMNNSKEEMRELAALFYSVVVST---VSGNELKSMIEQLIKTTKDNHSPEIQHGSLLALGFTVGRYLAKKKMRMSEQQDLERNADTLPDQEELIQSATETIGSFLDSTSPLLAIAACTALGEIGRNGPLPIPSEGSGFTKLHLVESLLSRIPSSKETNKMKERAIQTLGYFPVGDGDFPHQKLLLQGLMDSVEAKQIELQFTIGEAITSAAIGTSSVAARDAWQMTEEEYTPPAGAKVNDVVPWVLDVILNKHIISPNPHVRQAACIWLLSLVRKLSTHKEVKSHLKEIQSAFVSVLSENDELSQDVASKGLGLVYELGNEQDQQELVSTLVETLMTGKRVKHE-VSGETVVFQGGALGKTPDGQGLSTYKELCSLASDLSQPDLVYKFMNLANHHAMWNSRKGAAFGFNVIATRAGEQLAPFLPQLVPRLYRYQFDPNLGIRQAMTSIWNALVTD-KSMVDKYLKEILQDLVKNLTSNMWRVRESSCLALNDLLRGRPLDDIIDKLPEIWETLFRVQDDIKESVRKAAELALKTLSKVCVKMCDPAKGAAGQRTIAALLPCLLDKGMMSTVTEVRALSINTLVKISKSAGAMLKPHAPKLIPALLESLSVLEPQVLNYLSLRATE----QEKAAMDSARLSAAKSSPMMETINMCLQYLDVSVLGELVPRLCELIRSGVGLGTKGGCASVIVSLTTQCPQDLTPYSGKLMSALLSGLTDRN-SVIQKSCAFAMGHLVRTSRDSSTEKLLQKLNGWYMEKEEPIYKTSCALTIHAIGRYSPDVLKNHAKEVLPLAFLGMHEIADEEKSEKEECNLWTEVWQENVPGSFGGIRLYLQELITITQKALQSQSWKMK--AQGAIAMASIAKQTSSLVPPYLGMILTALLQGLAGRTWAGKEELLKAIACVVTAC 1599          
The following BLAST results are available for this feature:
BLAST of TCONS_00000828-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ECM290.000e+033.44Proteasome-associated protein ECM29 homolog OS=Hom... [more]
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