TCONS_00000776-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000776-protein
Unique NameTCONS_00000776-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length403

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000776-protein ID=TCONS_00000776-protein|Name=TCONS_00000776-protein|organism=Clytia hemisphaerica|type=polypeptide|length=403bp
MSTRLLLVVVWTLLFPLVTARYQWTSWSRPSDCSRTCGEGVSSRIRECKP
TGEDSQEGENDCPGAATIEEICFKPPCPLDPNKANCNCGCLLTQSSGSLR
SRLSSKDMFCHWVIKTQPGTKPILSINNVKNFDWKSGGIYISTGGSEHHR
YTEQDGVRLKKDFPFVIRGDGNVMNVSLHYSKKLNVSQMVELDASYTSTK
VAVVDEAKQTLNLPAIIGIAACAAIILIASIIAICRRMRNTSNSDKTKEE
KPQEEFEDASSVSGSNRSCGKHHKHNGTHASSKTSYSTPYSTGTLSQEER
ERLLATVNNDMFLQKEGSMVSGMPPVGYLPPGQAYVNYPVQNGQIVQPVH
MIHAQSTLTIQQLPQPAINYMIQQTQMSYNRQLPYEHSMSGTPYDYATSG
TEG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000479XLOC_000479Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000776TCONS_00000776Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
IPR000859CUB_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 24..78
e-value: 2.1E-6
score: 37.3
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 26..77
e-value: 1.0E-6
score: 28.8
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 21..77
e-value: 4.4E-9
score: 36.0
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 21..78
score: 11.343
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 21..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..297
IPR000859CUB domainSUPERFAMILY49854Spermadhesin, CUB domaincoord: 86..181

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000776-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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