TCONS_00000732-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000732-protein
Unique NameTCONS_00000732-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1634

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000732-protein ID=TCONS_00000732-protein|Name=TCONS_00000732-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1634bp
GTRIDGCRVCACQTSGPLPLERLNFGEXSKPSDIEIDSRKTIQNSLYKMM
NLSKSFAAQLISLESKSQNAFMDLVSSNIAYGLLGGKTERHLRDRVTLNE
VEYPTQFENENLDLLDQLYFLILNTTIIGEKARLLDTPYIKTALQRLNGG
ATVKGSRQVGSCTVSYDLKNMDDLIEVAECSSLNPYSQIEGQTSVTSLTF
ADDKNEKLKLRNVEVDIGIPIENVIETPLAENDEILNKTFIIQPDDLIVF
KLENFTEPSEGWASSALYVLIDVLDDFSFVDEDVSLYSQLAFNEMPTASR
RQGHLKKTFKPTSGENERTLMLQGSDYETALANNQSYYFGLDQDGSSNFT
VNITIYITTCRFWNTSTSRWEGFGCKPSPKTTLHLAVCSCNHLTSFGSSI
NIAPNKLDFTVLKKLDVENNPVMLATCIAIFFVYLILLLVAFNKDSKEAQ
VQHIIPFIGSEDGFFQYEVRIKTGAYPWAGTSANVGIQVLGTKCTSKARI
LQGDNPFQRNGLDIFRISLDRSIGKIRKIKIWHDNTGSDPSWYLERVIIR
SMVSGEKFFFYCNKWIGVDCGDEKLEHEFHVADIEEMRKFSTIFYDVIGR
SFNDYHLWLSIFEKPKFSKFTRVQRLTCLVTLVFSWMAVNAAWFRVAPND
EVDIYIGFKGYSFEELIIGAISALIVFPLNLLFLLLFRKSRQKQVETKPL
KIWKEPKRVMLESVDIDTTPLLDNRNHQGTNKSSESLDGDFSSLKRTKKQ
LRFFDNLNFLEDDDSSAEEAKEAIESDEPTVSGKQKMKKINFSNDEDIIR
LPRSFALPAKSLRLNVEPPLPAPSYLSHLPPPPEYRSSSLSYPSLNEFYA
GATSSTKQVIKKTHSDGSFGGLIPSPSDEENVEILHPLEELPQQENKPFF
DAMENFEDLAYADFLGRSTRESSTEARLSAQIKKNEELMVHLQIPNVVEL
DPQTRWTLPHWCTYIGFMCCFLISAFSIVIVITYGQQFGYHTSMKWLKCL
VFGFLEDFFLTFPFLLVFIAAFIALFIKPYDLDKVDHHDFFICPSGTPQP
PNKDRITPPTGTVLKDAISVGKQMRQGRKYRRDLLLQLLLLWLVVSLYFV
FHTPKHQEFMFKDRVRNELVPKFKSQNFHAEYFNWLEKVYIPYLYDANDT
WQMINVPRTKQYRVANPSCPFEDYRSVLCKDSILTRFPKTRDLILPHPLN
SNTKSEAKAMSDELREEVWLIPEARSIKNNFKKTNPAMQLSAYYDLSIYM
ERSGYTHAQLEINVVPYKDDITNLKGFGYFCMALLSVVLFILGYRALIKL
IVNWRWIFDIWFLNRVLFILVTIAGLVLHIYEIITLDNHDNVVQLDYLIK
HELAKHCFGVSMFLLLIRCVRLMSLSRVYKLMRKMLKRAQCLLFSVAGLH
IVVVIGFTNAGYLLFGAQLDGFRSYAESFLSTFLFRWWQPGGGQLRDITN
VAGVHLGMLWVILYTAYWYILAMNMFRMVLLNEWSDAKSKKMISSWKDIW
TGYFRSKGKKRKQVRFAVTDSSTNDPAVYYYVNNSSSNSKSSIEEIEIIE
KPDKIEEVKPKYNLPKLPYSNFELESNLISVLADLDRMITAENWEEESLS
KVEKELNIMRQNVQKGKQTKQLKRGNSKGNYKLT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000459XLOC_000459Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000732TCONS_00000732Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000434PC1
IPR001024PLAT/LH2_dom
IPR000203GPS
IPR013122PKD1_2_channel
Vocabulary: Biological Process
TermDefinition
GO:0001822kidney development
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001822 kidney development
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1599..1619
IPR000434Polycystic kidney disease type 1 proteinPRINTSPR00500POLYCYSTIN1coord: 665..689
score: 36.0
coord: 421..442
score: 15.15
coord: 1393..1414
score: 22.73
IPR001024PLAT/LH2 domainSMARTSM00308LH2_4coord: 465..582
e-value: 1.0E-5
score: 33.6
IPR001024PLAT/LH2 domainGENE3D2.60.60.20coord: 464..590
e-value: 1.8E-34
score: 118.0
IPR001024PLAT/LH2 domainPFAMPF01477PLATcoord: 467..568
e-value: 4.3E-20
score: 72.3
IPR001024PLAT/LH2 domainPROSITEPS50095PLATcoord: 465..580
score: 35.957
IPR001024PLAT/LH2 domainSUPERFAMILY49723Lipase/lipooxygenase domain (PLAT/LH2 domain)coord: 467..569
IPR000203GPS motifSMARTSM00303GPS_3coord: 356..405
e-value: 2.8E-7
score: 40.2
IPR000203GPS motifPFAMPF01825GPScoord: 359..397
e-value: 4.8E-6
score: 27.0
IPR000203GPS motifPROSITEPS50221GPScoord: 357..407
score: 12.539
IPR013122Polycystin cation channel, PKD1/PKD2PFAMPF08016PKD_channelcoord: 1202..1484
e-value: 7.5E-16
score: 57.7

Blast
[Close]
BLAST of TCONS_00000732-protein vs. Swiss-Prot (Human)
Match: PKD1 (Polycystin-1 OS=Homo sapiens GN=PKD1 PE=1 SV=3)

HSP 1 Score: 222.246 bits (565), Expect = 6.379e-58
Identity = 182/700 (26.00%), Postives = 311/700 (44.43%), Query Frame = 0 
Query:  101 VEYPTQF-ENENLDLLDQLYFLILNTTIIGEKARLLDTPYIKTALQRLN-------GGATVKGSRQVGSCTVSYDLKNMDDLIEVAECSSLNPY-----SQIEGQTSVTSLTFADDKNEKLKLRNV--EVDIGIPIENVIETPLAENDEILNK--TFIIQPDDLI--VFKLENFTEPSEGWASSALYVLIDVLDDFSFVDEDVSLYSQLAFNEMPTASRRQGHLKKTFKPTSGENERTLMLQGSDYET--------ALANNQSYYFGLDQDGS-SNFTVNITIYITTCRFWNTSTSRWEGFGCKPSPKTTLHLAVCSCNHLTSFGSSINIAPNKLDFTVLKKLDVENNPVMLATCIAIFFVYLILLLVAFNKDSKEAQVQHIIPFIGSEDGFFQYEVRIKTGAYPWAGTSANVGIQVLGTKCTSKARILQGDNPFQRNGLDIFRISLDRSIGKIRKIKIWHDNTGSDPSWYLERVIIRSMVSGEKFFFYCNKWIGV--DCGDEKLEHEFHVADIEEMRKFSTIFYDVIGRSFNDYHLWLSIFEKPKFSKFTRVQRLTCLVTLVFSWMAVNAAWFRVAPNDEVDI--YIGFKGYSFEELIIGAISALIVFPLNLLFLLLFRKSRQKQVETKPLKIWKEPKRVMLESVDIDTTPLLDNRNHQGTNKSSESLDGDFSSLKRTKKQLRFFDNLN---FLEDDDS 765
             E P++   ++  +L   L  +++ + ++ E+   L    I    +R +       GGA   G         S  L N+ D++++      NP+     S     T V S+ F      ++ +  +  E  I + + N  +     +    N   + ++QP   +  V  L++ + P+ G      Y L+D      ++ E+   Y  +  +  P  +       +  +P S        LQG+D+          +     SY+  L      S   V++ +Y + C++++     W   G  P  +T+   AVC   HLT+FG+S+ + P+ + F V  +   + N +++ TC      Y+++  +    D  +A     IPF G + G F+YE+ +KTG    +GT+A+VGI + G    S  R L GD  F RN LDIFRI+   S+G + KI++WHDN G  P+W+L+ VI+R + +    FF  N W+ V  +     +E E   A    + +F  +    + R F D H+WLSI+++P  S+FTR+QR TC V L+  ++  NA W+    +              S + + +G +S+++V+P+ L  L LFR SR K V   P      P     + +DID+   LD          S  LD  F +      +  F   +    FL+D  S
Sbjct: 2741 AESPSRMVASQAYNLTSALMRILMRSRVLNEEPLTLAGEEIVAQGKRSDPRSLLCYGGAPGPGCHFSIPEAFSGALANLSDVVQLIFLVDSNPFPFGYISNYTVSTKVASMAFQTQAGAQIPIERLASERAITVKVPNNSDWAARGHRSSANSANSVVVQPQASVGAVVTLDS-SNPAAGLHLQLNYTLLD----GHYLSEEPEPYLAVYLHSEPRPNEHNCSASRRIRPES--------LQGADHRPYTFFISPGSRDPAGSYHLNLSSHFRWSALQVSVGLYTSLCQYFSEEDMVWRTEGLLPLEETSPRQAVCLTRHLTAFGASLFVPPSHVRF-VFPEPTADVNYIVMLTCAVCLVTYMVMAAILHKLDQLDASRGRAIPFCG-QRGRFKYEILVKTGWGRGSGTTAHVGIMLYGVDSRSGHRHLDGDRAFHRNSLDIFRIATPHSLGSVWKIRVWHDNKGLSPAWFLQHVIVRDLQTARSAFFLVNDWLSVETEANGGLVEKEVLAASDAALLRFRRLLVAELQRGFFDKHIWLSIWDRPPRSRFTRIQRATCCVLLICLFLGANAVWYGAVGDSAYSTGHVSRLSPLSVDTVAVGLVSSVVVYPVYLAILFLFRMSRSK-VAGSP-----SPTPAGQQVLDIDSC--LD----------SSVLDSSFLTFSGLHAEQAFVGQMKSDLFLDDSKS 3407
The following BLAST results are available for this feature:
BLAST of TCONS_00000732-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PKD16.379e-5826.00Polycystin-1 OS=Homo sapiens GN=PKD1 PE=1 SV=3[more]
back to top