TCONS_00000694-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000694-protein
Unique NameTCONS_00000694-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length139

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000694-protein ID=TCONS_00000694-protein|Name=TCONS_00000694-protein|organism=Clytia hemisphaerica|type=polypeptide|length=139bp
MHSILSRLNVVFAYCLSVLAAVTFACFLTTYTVLPNADPDIEYEVSRQVV
KHVRDFTATRAKNDLGFLKFNLKSDLEPLFNWNVKQLFLYLAAEYETPEN
GLNQVVLWDKIIKRGENAYLDLREMNCKYYFFDDGSGLR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000438XLOC_000438Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000694TCONS_00000694Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007653SPC3
Vocabulary: Cellular Component
TermDefinition
GO:0005787signal peptidase complex
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006465signal peptide processing
Vocabulary: Molecular Function
TermDefinition
GO:0008233peptidase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006465 signal peptide processing
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005787 signal peptidase complex
molecular_function GO:0008233 peptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007653Signal peptidase complex subunit 3PIRSFPIRSF016089SPC3coord: 1..139
e-value: 9.9E-36
score: 120.8
IPR007653Signal peptidase complex subunit 3PFAMPF04573SPC22coord: 5..139
e-value: 2.8E-45
score: 153.7
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..26
score: 5.0

Blast
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BLAST of TCONS_00000694-protein vs. Swiss-Prot (Human)
Match: SPCS3 (Signal peptidase complex subunit 3 OS=Homo sapiens GN=SPCS3 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 3.052e-52
Identity = 76/139 (54.68%), Postives = 105/139 (75.54%), Query Frame = 0 
Query:    1 MHSILSRLNVVFAYCLSVLAAVTFACFLTTYTVLPNADPDIEYEVSRQVVKHVRDFTATRAKNDLGFLKFNLKSDLEPLFNWNVKQLFLYLAAEYETPENGLNQVVLWDKIIKRGENAYLDLREMNCKYYFFDDGSGLR 139
            M+++LSR N +FA+ LSV+AA+TF CF+TT     +    +   VSR ++K+V DFT  R ++DLGF+ F++ +DLE +F+WNVKQLFLYL+AEY T  N LNQVVLWDKI+ RG+N  L L++M  KY+FFDDG+GL+
Sbjct:    1 MNTVLSRANSLFAFSLSVMAALTFGCFITT--AFKDRSVPVRLHVSRIMLKNVEDFTGPRERSDLGFITFDITADLENIFDWNVKQLFLYLSAEYSTKNNALNQVVLWDKIVLRGDNPKLLLKDMKTKYFFFDDGNGLK 137
The following BLAST results are available for this feature:
BLAST of TCONS_00000694-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SPCS33.052e-5254.68Signal peptidase complex subunit 3 OS=Homo sapiens... [more]
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