TCONS_00000678-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000678-protein
Unique NameTCONS_00000678-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length250

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000678-protein ID=TCONS_00000678-protein|Name=TCONS_00000678-protein|organism=Clytia hemisphaerica|type=polypeptide|length=250bp
XQSIFPSQWKISKISPIPKIESPNEPSDYRPISILPILSKVYGKLIMIQM
TNFLEHQELLSQYQSGFRKGHCTVTTCIKIKNDILKAMHHGEITLAVLAD
FSKAFDTVDFETLIKKLHSLHFSKKSLSILANYLSSRQQYVQIDDKRSPV
LTVTNGVPQGSILGPVLFNIYVHDMASKTTAKCVQYADDTSIYRHTKPAN
LELISQEVQNDVNVIEEWSRDSNLIFNAKKTKSMLFATSQMARRHDFSFE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000424XLOC_000424Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000678TCONS_00000678Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 49..249
e-value: 9.3E-27
score: 93.3
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 12..239
e-value: 1.83039E-46
score: 155.142
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 14..237
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 18..239
e-value: 8.1E-44
score: 149.7
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..250
score: 17.26

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000678-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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