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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00000559-protein ID=TCONS_00000559-protein|Name=TCONS_00000559-protein|organism=Clytia hemisphaerica|type=polypeptide|length=190bp
MKYHTCSTNVKFRWDQVGNAIFQRYPNPWSKHVLTEDVISRKLEGPILKT
VRLISKTNKLPKLANKFVSNSSGYVVEESHVNAKEKTAVTYTRNLTFPHI
MVCEEKCTFSISQESKNWTMLKRESWISSSLYGFSKAAEMFGMERYKKNI
KKSLKGLNYVLSKMYVPEKIPTTIGMTLPQPIPQATCSSS Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR006797 | PRELI/MSF1_dom |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR006797 | PRELI/MSF1 domain | PFAM | PF04707 | PRELI | coord: 15..163
e-value: 4.7E-41
score: 140.1 |
| IPR006797 | PRELI/MSF1 domain | PROSITE | PS50904 | PRELI_MSF1 | coord: 1..169
score: 35.92 |
Blast
BLAST of TCONS_00000559-protein vs. Swiss-Prot (Human)
Match: PRLD1 (PRELI domain-containing protein 1, mitochondrial OS=Homo sapiens GN=PRELID1 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.715e-46 Identity = 70/168 (41.67%), Postives = 117/168 (69.64%), Query Frame = 0 Query: 1 MKYHTCSTNVKFRWDQVGNAIFQRYPNPWSKHVLTEDVISRKLE-GPILKTVRLISKTNKLPKLANK-FVSN--SSGYVVEESHVNAKEKTAVTYTRNLTFPHIMVCEEKCTFSISQESKNWTMLKRESWISSSLYGFSKAAEMFGMERYKKNIKKSLKGLNYVLSKM 164
+KY + ++ WDQV A +QRYPNP+SKHVLTED++ R++ L + RL++KTN++P+ A + F +N S YV+E+S V+ + +T T+T N+ +MV EE+C + ++ ++ WT ++RE+W+SSSL+G S+A + FG+ R+K N+ K++KG Y+L+K+
Sbjct: 2 VKYFLGQSVLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTPDQKLLSRRLLTKTNRMPRWAERLFPANVAHSVYVLEDSIVDPQNQTMTTFTWNINHARLMVVEERCVYCVNSDNSGWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTMKGFEYILAKL 169
The following BLAST results are available for this feature:
BLAST of TCONS_00000559-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 ( Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| PRLD1 | 1.715e-46 | 41.67 | PRELI domain-containing protein 1, mitochondrial O... | [more] |
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