TCONS_00000559-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000559-protein
Unique NameTCONS_00000559-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length190

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000559-protein ID=TCONS_00000559-protein|Name=TCONS_00000559-protein|organism=Clytia hemisphaerica|type=polypeptide|length=190bp
MKYHTCSTNVKFRWDQVGNAIFQRYPNPWSKHVLTEDVISRKLEGPILKT
VRLISKTNKLPKLANKFVSNSSGYVVEESHVNAKEKTAVTYTRNLTFPHI
MVCEEKCTFSISQESKNWTMLKRESWISSSLYGFSKAAEMFGMERYKKNI
KKSLKGLNYVLSKMYVPEKIPTTIGMTLPQPIPQATCSSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000331XLOC_000331Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000559TCONS_00000559Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006797PRELI/MSF1_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006797PRELI/MSF1 domainPFAMPF04707PRELIcoord: 15..163
e-value: 4.7E-41
score: 140.1
IPR006797PRELI/MSF1 domainPROSITEPS50904PRELI_MSF1coord: 1..169
score: 35.92

Blast
[Close]
BLAST of TCONS_00000559-protein vs. Swiss-Prot (Human)
Match: PRLD1 (PRELI domain-containing protein 1, mitochondrial OS=Homo sapiens GN=PRELID1 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.715e-46
Identity = 70/168 (41.67%), Postives = 117/168 (69.64%), Query Frame = 0 
Query:    1 MKYHTCSTNVKFRWDQVGNAIFQRYPNPWSKHVLTEDVISRKLE-GPILKTVRLISKTNKLPKLANK-FVSN--SSGYVVEESHVNAKEKTAVTYTRNLTFPHIMVCEEKCTFSISQESKNWTMLKRESWISSSLYGFSKAAEMFGMERYKKNIKKSLKGLNYVLSKM 164
            +KY    + ++  WDQV  A +QRYPNP+SKHVLTED++ R++     L + RL++KTN++P+ A + F +N   S YV+E+S V+ + +T  T+T N+    +MV EE+C + ++ ++  WT ++RE+W+SSSL+G S+A + FG+ R+K N+ K++KG  Y+L+K+
Sbjct:    2 VKYFLGQSVLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTPDQKLLSRRLLTKTNRMPRWAERLFPANVAHSVYVLEDSIVDPQNQTMTTFTWNINHARLMVVEERCVYCVNSDNSGWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTMKGFEYILAKL 169
The following BLAST results are available for this feature:
BLAST of TCONS_00000559-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRLD11.715e-4641.67PRELI domain-containing protein 1, mitochondrial O... [more]
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