TCONS_00000554-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00000554-protein
Unique Name	TCONS_00000554-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	526

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00000554-protein ID=TCONS_00000554-protein|Name=TCONS_00000554-protein|organism=Clytia hemisphaerica|type=polypeptide|length=526bp
MPKKAKKAKGKSKKDKKGRKSSKGVKVNNDDVLKQAIANACLWESRLGTV
EVAKNEYRDTTRTLLHENEKLQTQVSQTEKETVDVLSFLRDEDIKKNNTI
NKLQLMIKDLKKDYKKEKQGFIDDYTKQIETLQTSLTDKTNEVKLMQSEL
KLVKEFRRKRALMQKEIDDIKDNLFMNEKQHEHALEKIERKFFDEKIRMQ
QEANRKISELAERAHNEAISNLDDTTKSVYKENVRLNEALTYHIKAGEEL
SQHKENLEEQNKKLSSEKEMNSLIVEEKVIESKKIKKANSSLQQKVDDLE
KALTEVMSENNQKKTSLVQKHNQEQEGNKMEIARLQRIIELKNKEMSRVK
KLAKNILDQRSDVEKFFIESLEMVKTEIIRNRAQYRRDAEVAYNKRMTEA
HSGHSDYPKVRTFRHLKNSTNSVYADLRAAERWDGFDASVDLSELTWEQR
EQVLRLLFAKMNGQKTSKVSKSILPPINSKMDETKAHQPKPPSVQKAFLT
EADDPKEGVSSDASRVFSATEILAFT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000328	XLOC_000328	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00000554	TCONS_00000554	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR032777	DUF4515

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 61..81
None	No IPR available	COILS	Coil	Coil	coord: 243..270
None	No IPR available	COILS	Coil	Coil	coord: 332..352
None	No IPR available	COILS	Coil	Coil	coord: 122..149
None	No IPR available	COILS	Coil	Coil	coord: 282..309
None	No IPR available	COILS	Coil	Coil	coord: 153..191
None	No IPR available	COILS	Coil	Coil	coord: 100..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
IPR032777	Domain of unknown function DUF4515	PFAM	PF14988	DUF4515	coord: 85..272 e-value: 2.0E-17 score: 63.6

Blast

[Close]

BLAST of TCONS_00000554-protein vs. Swiss-Prot (Human)
Match: BBOF1 (Basal body-orientation factor 1 OS=Homo sapiens GN=BBOF1 PE=2 SV=3)

HSP 1 Score: 354.369 bits (908), Expect = 1.226e-116
Identity = 185/449 (41.20%), Postives = 309/449 (68.82%), Query Frame = 0

Query:   29 NDDVLKQAIANACLWESRLGTVEVAKNEYRDTTRTLLHENEKLQTQVSQTEKETVDVLSFLRDEDIKKNNTINKLQLMIKDLKKDYKKEKQGFIDDYTKQIETLQTSLTDKTNEVKLMQSELKLVKEFRRKRALMQKEIDDIKDNLFMNEKQHEHALEKIERKFFDEKIRMQQEANRKISELAERAHNEAISNLDDTTKSVYKENVRLNEALTYHIKAGEELSQHKENLEEQNKKLSSEKEMNSLIVEEKVIESKKIKKANSSLQQKVDDLEKALTEVMSENNQKKTSLVQKHNQEQEGNKMEIARLQRIIELKNKEMSRVKKLAKNILDQRSDVEKFFIESLEMVKTEIIRNRAQYRRDAEVAYNKRMTEAHSGHSDYPKVRTFRHLKNSTNSVYADLRAAERWDGFDASVDLSELTWEQREQVLRLLFAKMNGQKTSKVSKSILPPI 477
            ++ V+ +A ANA LWE+RL   E+++ +YRDT+R L   NE L+ +  + EK+ + VLS+L+ +D +K+N I KL+  + + K+  ++EK      YT+QI  L+     K  E+ ++ +ELK V++F++++  +++E+DD+K+NL   E+ H+  L ++E +FF+EK R++QEA +KI  LAERAH+EAI  L+D  ++V+KEN  L +AL YH+K  + L ++ + L+E +  L  +KE+N L+V+EK+++  + +    +LQ+KV +LE AL+ +  E   +   L Q    E +  ++EI +LQ ++++K++EM+RVKKLAKNILD+R++VE+FF+++L  VK +I+ +R  Y++ A+ A+N +M  A +G ++YPK+RTF   ++STNSV  DL  AE+W   + +VD+ +LTWEQ+E+VLRLLFAKMNG  + K ++S  PP+
Sbjct:   25 DESVVDRAKANASLWEARLEVTELSRIKYRDTSRILAKSNEDLKKKQCKMEKDIMSVLSYLKKQDQEKDNMIEKLKQQLNETKEKAQEEKDKLEQKYTRQINELEGQFHQKAKEIGMIHTELKAVRQFQKRKIQVERELDDLKENLRNTERIHQETLRRLESRFFEEKHRLEQEAEKKIIMLAERAHHEAIVQLNDAGRNVFKENDYLQKALAYHLKETDALQKNSQKLQESHTLLLHQKEINDLLVKEKIMQLVQQRSQIQTLQKKVVNLETALSYMTKEFESEVLKLQQHAMIENQAGQVEIDKLQHLLQMKDREMNRVKKLAKNILDERTEVERFFLDALHQVKQQILISRKHYKQIAQAAFNLKMRAACTGRTEYPKIRTFDGREHSTNSVNQDLLEAEKWTHIEGNVDIGDLTWEQKEKVLRLLFAKMNGCPSRKYNQSSRPPV 473

The following BLAST results are available for this feature:

BLAST of TCONS_00000554-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00000554-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
BBOF1	1.226e-116	41.20	Basal body-orientation factor 1 OS=Homo sapiens GN...	[more]

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TCONS_00000554-protein (polypeptide) - C. hemisphaerica